| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3586 |
|---|
| Symbol | |
|---|
| ID | 4898154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | - |
|---|
| Start bp | 678422 |
|---|
| End bp | 679618 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640114195 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_001045449 |
|---|
| Protein GI | 126464336 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4597] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.174346 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0312139 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATG CCAACCCGGG CCTGCGGGGC AAGCGCCCCC GGCGCAGCCC GAAGGACATC
CTCTACAGCG AGAGCTTCCG CACCGTGGTC TACCAGATCG CGCTGGCGGC GGCGGTGGCG
CTGCTCGGAT TCTACCTCTA CCAGAACGTC GTCGAGAACC TCGCCCGGCA GAACATCGCC
ACGGGCTTCG GCTTCCTCGG ACAGGTCTCG CAGTTCGAGA TCGGCGAGAC GCTCATCGCC
TATTCTGCGC GCGACACCTA CGGCCGCGCG CTGGCCGTGG GGCTCATGAA CACGCTCTCC
GTCTCGGCCG CGGGCATCGT GGTGGCGACG GTCATCGGCT TCTCGGTCGG CATCGCGCGG
GTCTCGAGCA ACTGGCTGCT CCAGCGTCTC GCCACCGCCT ATGTCGAGAT CGTGCGCAAC
ATCCCCGTCA TCCTGCAGGT GATCTTCTGG GCCGCGGTCA TCCGCAACCT GCCCGCGCCG
CGGCAGGCGG TCGAACTCTG GGGGATGGGC TTCCTGTCGA ACCGGGGGCT CACCTTCGCC
ATGCCCTCGG CCCATGCGGC GCATCTTTGG ATGCTGGCCG CCCTCGTCGC AGGCATCGCG
CTCGCCATCC TCGCCAGCCA CAAGGCCAAA CGGCACCGCG AGGCCACGGG GCGCTACATC
GACATGCTCT GGCCCTGCGT GGGCCTGATC GTGGGGCTGC CGCTTCTTGT CTGGCTGGGC
TTCGGCGCGC CGCACGAGAT CAGCTTCCCC GAGCGCCGCG GCTTCAACTT CGCGGGCGGC
GCCACCATCA GCCCCGAGTT CGTGGCGCTG ATGACGGGCA TCTCGCTCTA TTCCTCGGGC
TTCATCGCCG AGATCGTCCG GGCCGGCATT CAGGCCACCC CGCGCGGTCA GGTCGAGGCC
GCCCGCTCGA TCGCGCTGCG GCCCCGCTTC ATCCTGCGCT ATGTCGTGCT GCCGCAGGCG
CTGCGCGTGA TCGTGCCGCC GCTGACCAGC CAGTATGTGA GCCTCATCAA GAACAGCTCG
ATCGCCGTCG TGATCGGCTA CCCGGATCTC GTGAACATCG GAAACACGGT GATGAACCAG
ACCGGGCAAG CGGTGGAAGC CATCGCCGTG ATGATGCTCG TCTATCTCAT CGTCAGTCTC
GTGACGTCGC TCCTGATGAA CTTCTACAAC CGCCTCGTCG CGATCAAGGA GCGGTAA
|
|---|
| Protein sequence | MTDANPGLRG KRPRRSPKDI LYSESFRTVV YQIALAAAVA LLGFYLYQNV VENLARQNIA
TGFGFLGQVS QFEIGETLIA YSARDTYGRA LAVGLMNTLS VSAAGIVVAT VIGFSVGIAR
VSSNWLLQRL ATAYVEIVRN IPVILQVIFW AAVIRNLPAP RQAVELWGMG FLSNRGLTFA
MPSAHAAHLW MLAALVAGIA LAILASHKAK RHREATGRYI DMLWPCVGLI VGLPLLVWLG
FGAPHEISFP ERRGFNFAGG ATISPEFVAL MTGISLYSSG FIAEIVRAGI QATPRGQVEA
ARSIALRPRF ILRYVVLPQA LRVIVPPLTS QYVSLIKNSS IAVVIGYPDL VNIGNTVMNQ
TGQAVEAIAV MMLVYLIVSL VTSLLMNFYN RLVAIKER
|
|---|
| |