Gene Rsph17029_3561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3561 
Symbol 
ID4898742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp650748 
End bp651383 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content67% 
IMG OID640114170 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_001045424 
Protein GI126464311 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.367656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.425944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAACC ACTTCGACAG CCCCTTTCGG GGCGTGACCC TCGACAAGCA GGTCACGAAC 
CCGAACATCC TCGTCGGGCG CCACAGCTAT TACTCGGGCT ATTACCACGG CCACGGTTTC
GACGACTGCG CCCGCTATCT CCTGCCGGAC GCGGGCGTGG ATCGGCTTGT GATCGGCAGC
TTCTGCTCCA TCGGATCGGG GGCCGCCTTC ATCATGGCCG GCAATCAGGG CCACCGGGCG
GACTGGATCA GCACCTTCCC CTTCTTCTGG ATGCCGGAGG TGCCGGCCTT CGCGGAGGCG
CGAAACGGCT ATCAACCCGC CGGAGACACG ATCATCGGCA ACGACGTCTG GATCGGCTCG
GAGGCGGTCA TCCTGCCCGG GGTGACGGTC GGCGATGGCG CAATCGTTGG CACCCGCGCC
GTCGTCACGC GCGACGTCCC GCCCTATGCC ATCGTCGCAG GCAATCCGGC GCGGGTGATC
CGCCACAGGT TCGAGGAGGA GGACATCCGG CTCCTCCTCG ACATGCGCTG GTGGGACTGG
CCGGAGGAGG CGCTGCGCGC GGCCATGAGC CTGATGACGG CCGGGGATGT GCGGCGGCTT
CATGCCTATT GGGCGCGCAA TATCCGGTCG CGGTGA
 
Protein sequence
MQNHFDSPFR GVTLDKQVTN PNILVGRHSY YSGYYHGHGF DDCARYLLPD AGVDRLVIGS 
FCSIGSGAAF IMAGNQGHRA DWISTFPFFW MPEVPAFAEA RNGYQPAGDT IIGNDVWIGS
EAVILPGVTV GDGAIVGTRA VVTRDVPPYA IVAGNPARVI RHRFEEEDIR LLLDMRWWDW
PEEALRAAMS LMTAGDVRRL HAYWARNIRS R