Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3555 |
Symbol | |
ID | 4898430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | + |
Start bp | 643555 |
End bp | 644253 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640114164 |
Product | ABC transporter related |
Protein accession | YP_001045418 |
Protein GI | 126464305 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.651056 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGAGG TCCGCGACCT GCGCGCCGGC TACGGCCGGA TGGAGGTGCT GCACGGGGTG AGCGTCTCGG CGGTCTCGGG GCGGCCCACG GTGGTGATGG GGGCGAACGG CGTGGGCAAG ACCACGCTCT GCCGCGCGAT CACCGGGCTC ATCCCGCTCC GCTCCGGCGC GATCCTGCTC GACGGCGAGG ATCTCTCGCG CTGCGATCCG GCCGAGCGGG TGCGCCGGGG CGTGGCCCTC GTGCCCGAGG GGCGGCAGGT CTTCCCCGAG ATGACCGTGC GCGAGAACCT GCGCCTCGGC GCCTATGTCC ATGGCGAGCC GACCGCGGCC CAGTTCGACG ACGTGACCGA GCTCTTCCCG ATCCTCGCCG AGCGGCAGGG CCAGATGGCG GGGCTCCTGT CGGGGGGCGA GCAGCAGATG CTCGCTCTGG CGCGGGCGCT GATGGCGCGG CCCCGCGTCC TCTTGCTCGA CGAGCCGAGC CAGGGCCTTG CCCCCAAGGC GGTGGCCCAG GTGGGCCAGG CCGTCACGAG GATCGCCAGC CGCGGCGTGG CCGTGCTGCT GGTCGAACAG AACCTGACGC TGGCCGAGAT GATCGCGCGC CATGCCGTCG TTCTCGAAAG CGGCGCTGTC GCCGCCGAGG GGCCTGCGGA CGAGCTGCTC TCGTCCGGGG CCGTCGAAGC CAGCTATCTG GGACATTGA
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Protein sequence | MLEVRDLRAG YGRMEVLHGV SVSAVSGRPT VVMGANGVGK TTLCRAITGL IPLRSGAILL DGEDLSRCDP AERVRRGVAL VPEGRQVFPE MTVRENLRLG AYVHGEPTAA QFDDVTELFP ILAERQGQMA GLLSGGEQQM LALARALMAR PRVLLLDEPS QGLAPKAVAQ VGQAVTRIAS RGVAVLLVEQ NLTLAEMIAR HAVVLESGAV AAEGPADELL SSGAVEASYL GH
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