Gene Rsph17029_3553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3553 
Symbol 
ID4899080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp641860 
End bp642855 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content71% 
IMG OID640114162 
Productinner-membrane translocator 
Protein accessionYP_001045416 
Protein GI126464303 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGGA CCGATCTCCT CCGCGTGACG GTCGCGGCCG TCGCCCTCTT CCTCGTCGCG 
GTCACGCTCG CGCTCAGGCT GGATGACTAT CTCCTCTATG TCGTGACGCT CGGCGCCATC
TTCGCGACGC TGGCCGTCTC CTTCGACGTG CTTCTGGGCT ATACGGGCTA TCTCTCGCTC
GCCCACGGCG CGCTCTTCGG CGTCGGCGCC TATGCCTGCG GGATCCTGAC CGCGCATCAC
GGCTGGCCCT TCTGGGCGGC GCTGCCCGCC GCGGGTCTGG TTGCCGGAGC GGCGGGCGCG
GTGATCGCGC TGCTCGCCTT CCGCACCCGC GGGCTTTACT TCGCGGTCCT CACCCTCGGG
ATCGGCCTCA TCGGCCACCA GCTGTTTCTG GTTCTGGCAG GCCTCACCGG CGGCGTGGGT
GGCTTCGTGG GCATCCCCAG CCCGGGACGG CCCGACTGGG TGCCGCTCGA CCAGAACGGC
TGGAACGCCC TGCTCGCCCT CGCGCTGCTG CTTGCGACCT TCCTCGCCGC GCAGCTCTTC
GTCCGCTCGC GGCTCGGGGC CGCCTGTCTC GCGGTGCGCG AGGACCTGAC CCTCGCTCAG
GCGCTCGGCA TCCGCGTGGG ACAGGCGCGT CTCGCGGCCT TCGTCTTCAG CGCCATCTTC
ACGGGCTTTG CCGGTGCGCT CTTCGCCGCC ATCTCGAATT TCGTGGCGCC CGAAAGCTTC
ACCGTGCTGG GCGCGGGCTT CCAGCTCGTG GCGCTGGTGG TCGTGGGGGG CATGGGCACG
CTCTGGGGCC CGATTCTCGG AGCAGCGCTC CTGACCGCGC TGCCCGAGGC GTTGCGCGTG
GCCTCGGGCT ACAGCCTGAT CGCCTATGGT GTCCTCCTCC TCGTCTTCGT CATCTTCGCG
CCGCGGGGCC TTGCGAGCCT CGCCACCGAC GGTCTCGCCC GGCTGAGGAC CGGGGCCGGC
TTCCGCGCCG CGCCGGCCGG GGAGCGGCGG CCATGA
 
Protein sequence
MPRTDLLRVT VAAVALFLVA VTLALRLDDY LLYVVTLGAI FATLAVSFDV LLGYTGYLSL 
AHGALFGVGA YACGILTAHH GWPFWAALPA AGLVAGAAGA VIALLAFRTR GLYFAVLTLG
IGLIGHQLFL VLAGLTGGVG GFVGIPSPGR PDWVPLDQNG WNALLALALL LATFLAAQLF
VRSRLGAACL AVREDLTLAQ ALGIRVGQAR LAAFVFSAIF TGFAGALFAA ISNFVAPESF
TVLGAGFQLV ALVVVGGMGT LWGPILGAAL LTALPEALRV ASGYSLIAYG VLLLVFVIFA
PRGLASLATD GLARLRTGAG FRAAPAGERR P