Gene Rsph17029_3552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3552 
Symbol 
ID4899079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp640991 
End bp641860 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content68% 
IMG OID640114161 
Productinner-membrane translocator 
Protein accessionYP_001045415 
Protein GI126464302 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACC TCTTCGTCCA GCAACTGGTC AACGGGCTCG CGCTGGGCAG CACCTATGCC 
CTCGTGGCCC TCGGCCTCAC GCTGATCTTC GGAGTGCTGC TGATCCCGAA CTTCGCCCAT
GGCGAGTTCT ACATGCTGGG GGCGTTCCTC ACCTATGCGA TGGTGCTGGC CGGGATGAAC
TTCTGGCTGG CGATGGCGCT CGCCGTGGGC GCCGTGATCC TGCTCGGCTG TCTCGTGGAC
CGGCTGGCCT TCAAGCCGGT CGAGCAGGCC CCGCCGCTCA GCATGATGAT CTCGGCGCTG
GCCGCCTCGA TCATCCTGCA GCAGAGCGCG ATGCTGATCT GGGGCGGCGA GGCGCGCACC
ATCCCCGCCC CTGTCACCGG GGTGCTGCGC ACGCCCTTCT TCATCGTGAC CTGGATGCAG
CTCATCGTGA TGGCGAGCCT CCTGCTCGCC GCGGCTGGGG TCTGGCTCGT GCTCAACCGC
TCGCGGCTGG GGCTGGCCAT CCGGGCGGTG GCGCAGAACC GCGACGCGGC GCTCCTGATG
GGGATCAGCA TGTTTCAGGT GCGGCTCGCG ACCTTCGCCA TCGGCGCGGC GCTGGGCGCC
ATCGCGGGCG CGCTGCTGGG CGCCACCTTC CCGATCTATC CGACCATGGG CGTCAACCCG
GTGCTCAAGG CCTTCGTCGT ACTCGTCCTC GGCGGCATCG GCAGCCTGCC GGGCGCGGTC
TTCGGCGGGC TCTTCCTCGG CGTCGTCGAG GTGATGGTGG CGGGCTACAT CTCGTCCGAA
TTGTCCGACA TCGGCGCCTT CGCCATCCTC GTCGCCGTCC TGCTGCTGCG GCCGCAGGGC
TTCTTCGGCC AAGCACAGGT GGAACGCTGA
 
Protein sequence
MIDLFVQQLV NGLALGSTYA LVALGLTLIF GVLLIPNFAH GEFYMLGAFL TYAMVLAGMN 
FWLAMALAVG AVILLGCLVD RLAFKPVEQA PPLSMMISAL AASIILQQSA MLIWGGEART
IPAPVTGVLR TPFFIVTWMQ LIVMASLLLA AAGVWLVLNR SRLGLAIRAV AQNRDAALLM
GISMFQVRLA TFAIGAALGA IAGALLGATF PIYPTMGVNP VLKAFVVLVL GGIGSLPGAV
FGGLFLGVVE VMVAGYISSE LSDIGAFAIL VAVLLLRPQG FFGQAQVER