| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3549 |
|---|
| Symbol | |
|---|
| ID | 4898420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | + |
|---|
| Start bp | 637474 |
|---|
| End bp | 638196 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640114158 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001045412 |
|---|
| Protein GI | 126464299 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCAGGCG ACTATCTGGA CGGCAAGGTG GTGCTCGTCA CCGGCGGGGC CAGCGGCATC
GGCCGCAGCG TGGCGGAGGT CTGTGTCGAG CTGGGCGCGC GGACCGCGAT CTGCGATCTC
GCCCCGGGCG AGGCGCCGGA GGGGCAGGTC GCGCTGAACT GCGACGTGAC GGACCCTGCC
GCGGTCGAGC GCGCCTTCGC TGCGGCGCGC GAGGCCTTCG GGCGGGTCGA TGCGGTGGTC
AATTGCGCGG GCGTCTGGCG GCCGCGCAGC GACGGGCCGA TCACCGCCGT CTCGGACGAG
ACCTGGGACA GGATCATCGC CGTCAATCTT ACCGGCACCT TCAACGTCTG CCGCGAGGCC
GTGCGCGTGA TGGAGGCGCA GGGCCACGGC AGCATCGTGA CCATCGCCTC GGTCGTGGCG
ATCACCGGCT GGGAGAAGCT GAACGCCTAT TCCGCCTCGA AGGGCGGCGT GCTCTCGCTC
AGCCGGGCGC TCGCGATCGA ATGCGGGCCC AAGAACATCC GCGTGAACTG CATCTGCCCG
GGCGTGATCG AGACGCCGAT GACCGAGAAG GTGCTGGCCT ATTCGCAGCC CGACGTGCTG
CCCATCGGGC GTCTCGGCCA TCCGCGCGAC ATCGCCCATA CCGCGGCCTT CCTCTGCTCG
GACCGGTCCG GCTTCACCAC CGCCGCCACC GTCGTCGTCG ACGGAGGCTT CAGTGCAGCC
TGA
|
|---|
| Protein sequence | MSGDYLDGKV VLVTGGASGI GRSVAEVCVE LGARTAICDL APGEAPEGQV ALNCDVTDPA
AVERAFAAAR EAFGRVDAVV NCAGVWRPRS DGPITAVSDE TWDRIIAVNL TGTFNVCREA
VRVMEAQGHG SIVTIASVVA ITGWEKLNAY SASKGGVLSL SRALAIECGP KNIRVNCICP
GVIETPMTEK VLAYSQPDVL PIGRLGHPRD IAHTAAFLCS DRSGFTTAAT VVVDGGFSAA
|
|---|
| |