| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3543 |
|---|
| Symbol | |
|---|
| ID | 4898781 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | - |
|---|
| Start bp | 630296 |
|---|
| End bp | 630793 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640114152 |
|---|
| Product | tripartite ATP-independent periplasmic transporter DctQ |
|---|
| Protein accession | YP_001045406 |
|---|
| Protein GI | 126464293 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.186116 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGACTA TGATCAGGGG GCGCTCCCCC GAGGAGTGGC TGGGTGTCCT CCTCATGACG
CTCGTGCTGG TGCTTCTCAG CATGCAGGTG ATCGGCCGCT ATGTGCTGGG CTGGTCCTTT
GCATGGATCG AGGAAGTGTC GCGCTTCGCC TTCGTCTGGG CGGTCTATTT CGGCTTTGCC
GTCGCGGCCG AGAAGGACCG CCACATCCGC GTCTCGGTGC AGATCGCCTT CCTGCCCCCC
CGCGCGCAGA AGATCCTTCT GACCGTGGCC GACCTGATCT GGCTCGGCTT CAACGCGCTC
GTGATCTGGT TCGGCACGAT CTACATCGCC GACATGTTCG AATTCCCGAT GGTCTCGCAG
ACCACGGGCA TCAACATCGC CTGGGTCCAG ATGATCGTGC CCCTCGGGTT CCTGCTGCTC
AGCTTCCGGG TCATCCAGGT CATGATCCGG CGCTGGAAGA ACGACGAGGG TGTCATCGAC
ACCCGCATGG ACGAGTGA
|
|---|
| Protein sequence | MLTMIRGRSP EEWLGVLLMT LVLVLLSMQV IGRYVLGWSF AWIEEVSRFA FVWAVYFGFA
VAAEKDRHIR VSVQIAFLPP RAQKILLTVA DLIWLGFNAL VIWFGTIYIA DMFEFPMVSQ
TTGINIAWVQ MIVPLGFLLL SFRVIQVMIR RWKNDEGVID TRMDE
|
|---|
| |