| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3542 |
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| Symbol | |
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| ID | 4899101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | - |
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| Start bp | 628996 |
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| End bp | 630288 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640114151 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001045405 |
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| Protein GI | 126464292 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.521345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAC CCATTATTCT GACGCTGGCC TTCGTCCTGT TCCTCATCCT CGGGGTGCCG
GTCGCCGTGT CGATCGGGCT CGCCGCCGTG GCGGGGATGA TCGTGGCCGG GATCCCGCTG
TCCTATGTGG TTCAGGCGGC CTACTCTGCG GTCAACGACT TCCTCATCAT CGCCGTGCCG
ATGTTCGTTC TGGCGGGCGT GCTGATGGAG AAGGGCGGCC TCACGCAACG GCTGATCGCC
TTCTCGCGGA CGCTCGTGGG CAGGTCGCCC GGGGGGCTCG CGAGCGTGAC CATCGTCGCC
TGCACCTTCT TCGCCGCGAT CTCGGGCTCG GGCCCCGCCA CGGCGGCGGC CATCGGGTCG
ATCATGATCC CCACCATGAT CAAGGAGGGC TACCACAAGT CCTTCGCCGC CGCGATCACC
TCGAATGCGG GCGGCATCGG CGTCGTCATC CCGCCCTCGA TCCCGATGAT CATCTACGGC
ATCACCGCCG AGGTCTCGAT CACCGGCCTC TTCATCGCGG GCGTCATCCC GGGGCTGATG
CTGGCCGTGG CCCTGACGGC CGTGTCGCGC TACATCTCGA CCAAGCGCGG CTATGCGGTG
GCCAACCCCG AAGGCCGCAG CCTGAAGCGG ATCGGCGCCG CCGCCTGGGA GGCCCGCTGG
GCCCTGCTCG CCCCGATCAT CATCCTCGGC GGGATCTATA CCGGCATCTT CACGGTGACC
GAGGCCTCCA TCGTGGCCGT GCTCTATGCG CTCTTCGTCG GCATCTTCAT CTATCGCACG
ATCACCCTGC CCGGCTTCAT CGACTCGATG TCCTACGCGG TGCGCCTGAC CGGGGTCGTG
CTGTTCGTGC TGGTCAGCGG TCGCCTTCTG GGCCGCGTGC TCACGATCTT CCAGGTGCCG
CAGGAATTCT CCGCCTTCAT GATCGCCACC TTCGACAACC CGGTGGTGCT GGTCCTGCTC
ATCATCGCGC TGCTGATCTT CGTCGGCATG TGGATGGAGA CCCTGACCCA GCTCATCATC
CTGACGCCGC TGCTGCTGCC CGTGGCGGTC AGCGCCGGGA TCGATCCGAT CCAGTTCGGG
ATCATGTTCG TCATCGCCTG CGAGATCGGC TATTCGACGC CGCCGCTCGG GGTGAACCTG
TTCGTCGCGA GCGAGATCAG CAACGAGACG GTCGAGCGCG TGAGCAAGGC GGCGCTGCCG
CTGATCGCCG CCGAGATCGT GGTGCTGCTC CTCGTGACCT TCATCCCGCA GCTGTCGCTG
TTCCTGCCCC GGCTCATGGG CCTCGTGCAG TGA
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| Protein sequence | MSAPIILTLA FVLFLILGVP VAVSIGLAAV AGMIVAGIPL SYVVQAAYSA VNDFLIIAVP
MFVLAGVLME KGGLTQRLIA FSRTLVGRSP GGLASVTIVA CTFFAAISGS GPATAAAIGS
IMIPTMIKEG YHKSFAAAIT SNAGGIGVVI PPSIPMIIYG ITAEVSITGL FIAGVIPGLM
LAVALTAVSR YISTKRGYAV ANPEGRSLKR IGAAAWEARW ALLAPIIILG GIYTGIFTVT
EASIVAVLYA LFVGIFIYRT ITLPGFIDSM SYAVRLTGVV LFVLVSGRLL GRVLTIFQVP
QEFSAFMIAT FDNPVVLVLL IIALLIFVGM WMETLTQLII LTPLLLPVAV SAGIDPIQFG
IMFVIACEIG YSTPPLGVNL FVASEISNET VERVSKAALP LIAAEIVVLL LVTFIPQLSL
FLPRLMGLVQ
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