| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3541 |
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| Symbol | |
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| ID | 4899100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | - |
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| Start bp | 627975 |
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| End bp | 628964 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640114150 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_001045404 |
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| Protein GI | 126464291 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.106923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAGA AAACACTGGT GGCCTCGGCC CTGTGCCTGA TGATGGCGCC TGCCGCCTTC
GCGCAGGACT ACACCATCCG GCTGTCGCAC GGCGACAACG AGAGCAATCC GACCCACCTG
ACGGCGGTGA AGTTCCAGGA GCTGGTGAAG GAATACACTG AAGGCAAGGC CGAGGTGCAG
ATCTTCCCGA GCAACTCGCT CGGCACCGAA ACCGAGGTGG CGCAGGCGCT GCGGATGGGC
TCCATCGAGG CCGAGATCCT CTATACCGGC AACCTCGTGC CGCTCGCGCC TTCGGCCGGC
GTCCTGATGC TGCCCTACGC CTATACCTCG ACCGAGCAGG CGCACAAGGC GATGGATGCG
CTGATCGATC CGCTGAACGA GCGTCTGACC AAGGAAGCCG GCGTGCGCGC GCTCGGGCTG
ATGGAGAAGG GCTTCCGGGT CCTGACCACC AACAAGCCCG TGACCACGCT CGAGGATCTG
AAGGGCCTCA AGATCCGCGT CTCGCCCAAC GACATCGCGA TCAAGACCTT CCGCGCCTGG
GGGATCGAGC CCCTGCCGAT GGACTGGGCC GAGGTCTTCC CCGCGCTGCA GCAGCGCGTG
ATCGACGGTC AGGAGAACCC CTACACCACG GCCATCTCCT CGCGCTTCTT CGAGGTTCAG
AGCGACATCA CCGAGATCCA CTACATGATG TGGACAGGCC CGCTCCTGAT CAGCGAGCGC
GCCTTCCAGA AATATCCCGA GGATATCCAG CAGGCGCTGC TGCGCGCCGG CCGCGAGGCG
GTGGACTACG GGCGGCAGGT GTCGGCCGAG CTCACCGAAC AGTCGAAGGC CGAGCTGGTG
AAGAACGACA TGACCCTGCA CGGCGCGCCG AAGGACGAGG AGAAGTGGGA AGCGGCGGCC
GCGGCCCTCT GGCCGGAGTT CTACGACCAG ATCGGCGGCG AGGAATGGGC CACGCAGGCC
ATCGAGATCA TCAAGGCCAC CGAGAAGTAA
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| Protein sequence | MLKKTLVASA LCLMMAPAAF AQDYTIRLSH GDNESNPTHL TAVKFQELVK EYTEGKAEVQ
IFPSNSLGTE TEVAQALRMG SIEAEILYTG NLVPLAPSAG VLMLPYAYTS TEQAHKAMDA
LIDPLNERLT KEAGVRALGL MEKGFRVLTT NKPVTTLEDL KGLKIRVSPN DIAIKTFRAW
GIEPLPMDWA EVFPALQQRV IDGQENPYTT AISSRFFEVQ SDITEIHYMM WTGPLLISER
AFQKYPEDIQ QALLRAGREA VDYGRQVSAE LTEQSKAELV KNDMTLHGAP KDEEKWEAAA
AALWPEFYDQ IGGEEWATQA IEIIKATEK
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