Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3536 |
Symbol | |
ID | 4899054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | + |
Start bp | 619640 |
End bp | 620254 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640114145 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001045399 |
Protein GI | 126464286 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.595735 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGAGGGA TAGACAGTCT GACGGATGAG ACCTCCGGCA ACCGGTCCGG GCCCGAGGCG GCGACGGGGC AGGGCACGCC CCGGGCCGAC CTCGAGGCAC TGATCGCCTG TTGCGCCATG GGTGACCGGG GCGCGTTCGA AACGCTCTAC GATGCCACCA GCGCGAAACT TCATGCGGTC TGCTGCCGTA TCCTCGGGCG TGGACAGGGG GCCGAGGATG CGATGCAGGA TGCTTACGTC AAGATCTGGA CCCATGCCGG TCGGTATCGG GTGACCGGCC ACTCGCCGAT GACCTGGCTC ATCACGATCG CGCGCAACAC GGCCATCGAC CGGCTGCGGG CTCAGCGCAG GGGCGGTGAT GTCACCGAAT ATCACGACGT CCATCCCGCC GCCGGATCCA ACCCGGAGAC GAGGATGCTC GCGCGCGCCG AGGCGGGGCG CATCCGGGCC TGTCTGGACG AGCTGGGCGC GGACCGTCGC CGCGCCATCA CCGGGGCCTA TCTGGATGGG TTGAGCTATG CGGACCTGGC GGACCGTGCC GGAATTCCGC TGAATACCAT GCGCACATGG CTGAGACGCG GCCTCATGGC GCTCAAGGAC TGCGTGGCCA GATGA
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Protein sequence | MRGIDSLTDE TSGNRSGPEA ATGQGTPRAD LEALIACCAM GDRGAFETLY DATSAKLHAV CCRILGRGQG AEDAMQDAYV KIWTHAGRYR VTGHSPMTWL ITIARNTAID RLRAQRRGGD VTEYHDVHPA AGSNPETRML ARAEAGRIRA CLDELGADRR RAITGAYLDG LSYADLADRA GIPLNTMRTW LRRGLMALKD CVAR
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