Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3522 |
Symbol | |
ID | 4898193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | + |
Start bp | 602566 |
End bp | 603297 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640114126 |
Product | RNA methyltransferase |
Protein accession | YP_001045386 |
Protein GI | 126464273 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0565] rRNA methylase |
TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0833085 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCATCG AACCCGTCTT CATCCTCGTC CGCCCGCAGA TGGGCGAGAA CATCGGTGCG GCCGCGCGCG CCATGCTGAA CTTCGGCCTC GGCCGCCTGC GCATCGTCGA TCCGCGCGAC GGCTGGCCCA ACCCGAAGGC GGTGGCCATG GCCTCGGGGG CGGGGCGGCT TCTCGATCAT GCCGGCCTCT TTCCCACGGT GGCCGAGGCG ATCCGCGACT GCGACTATGT CTTCGCCACC ACCGCCCGCG GGCGCGAGCT CACCAAGCCC GTGATGACGC CCGAGCGCGC CATGGCGCAC GGTCGGGCGC TGACGGGCGA GGGGCGGCGC GTGGGCATCC TCTTCGGGCC CGAGCGCACG GGGCTCGAGA ACGAGGATGT GGCGCTGGCC AACGCCATCG TGACCGTGCC GGTGAACCCC GAGTTCTTCT CGCTCAACCT CGCGCAATGC GTGCTGCTTC TGGCCTACGA ATGGCGGCGC CAGCATGACG AGACCCCGCC CGAGGTCATC GACATGGCGC GGGTGGATTT CGCGAGCGGC CTCGAGGTCG AGAAGCTCGG CGATCATTTC GAGGAGAAGC TCGAGGCCGC GGGCTTCTTC TTCCCGCCCG AGAAGGCGCC GGGCATGAAG CTCAACCTGC GCAACATGTG GGCCCGGCTG CCTCTGACGC GCGCCGACGT CCAGACCCTG CACGGGATGC TGCGCCAGAT CGCCTGGAAG CTGAAACAGT AG
|
Protein sequence | MSIEPVFILV RPQMGENIGA AARAMLNFGL GRLRIVDPRD GWPNPKAVAM ASGAGRLLDH AGLFPTVAEA IRDCDYVFAT TARGRELTKP VMTPERAMAH GRALTGEGRR VGILFGPERT GLENEDVALA NAIVTVPVNP EFFSLNLAQC VLLLAYEWRR QHDETPPEVI DMARVDFASG LEVEKLGDHF EEKLEAAGFF FPPEKAPGMK LNLRNMWARL PLTRADVQTL HGMLRQIAWK LKQ
|
| |