| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3482 |
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| Symbol | |
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| ID | 4898521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | - |
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| Start bp | 559846 |
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| End bp | 562458 |
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| Gene Length | 2613 bp |
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| Protein Length | 870 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640114080 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_001045347 |
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| Protein GI | 126464234 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACG AGACCCAGCC GAAGAGCCGC AGCTTCACCG ACGAGGAGCT TCAGGATCTC
GTCGCGAGCA CCGACAGCGG CGGACGAAAT CCCTCCAACC GCACCGTCGC GATCCTGATC
GCGGCGACGG CGTTCCTGTG GTCGCTGTTC CAGCTCTGGA TCGCGCAGCC GCAGCTCTGG
TTCGGCCAGT ATCTGCCCGT GCTGAACTCG TCGCAGACCC GGCCCATCCA CCTGACCTTC
GCGATCCTGC TGGCCTTCCT CGCCTATCCG GCGCTGAAGA GCTCGCCGCG CGACCGGGTG
CCGATCCTCG ACTGGGTGCT GGCCCTCGCG GGGGCGGGCT GCGCCTTCTA CGTCTTCCTC
TATTCGCGCG AGCTGGCCGC GACCGCGCGC GCAGGCCTGC CGACCCAGAC CCAGATCGTG
GTGGGCGCGG TGGGGATCGT GCTCCTCCTC GAGGCCTCGC GCCGCGCGCT CGGGCCCGCG
CTGACCGTGG TGGGGGCGAT CTTCCTGCTC TACGCCTGGG TGGGGCAGGG CTGGCTCATT
CCCGACATCA TCGCCCATTC GGGCCTCTCC TTCACCTCGA TCATCAACGC CCAGTGGCTC
GACACCAACG GCGTGTTCGG CATTCCGCTC GGCGTCTCGA CGGCCTTCGT CTTCCTCTTC
GTCCTGTTCG GGGCGCTGCT CGACAAGGCG GGAGCCGGCA ACTACTTCAT CCAGCTGGCC
TTCGCGGGTC TCGGCGCGCT GCGCGGCGGA CCTGCCAAGG CTGCCGTCGT GGGCTCGGCC
ATGACCGGCC TCATCTCCGG CTCCTCCATC GCCAACGTGG TGACGACGGG GACCTTCACC
ATCCCCCTGA TGAAGCGGGT GGGCTTCTCG TCGGAGAAGG CGGGCGCGGT CGAGGTGGCC
TCGTCGGTCA ACGGGCAGAT CATGCCGCCG GTGATGGGGG CCGCCGCCTT CCTGATGGTC
GAGTTCGTGG GCATCTCCTA CGTCGAGGTC ATCAAGCACG CCTTCATCCC GGCGGTGATC
TCCTACATCG CACTGGTCTA TATCGTGCAT CTCGAGGCGC TGAAGCAGGA CATGCCCGCG
CTCGGACCGG CGGCCAACCT CGGGCGCATG TTCGCGAAGA TCGCGGTGGG CTTCGTGGTG
ACGGGCGCAG CCTTCACCGG CCTCGTCTGG GCGATCCAGG CGCTGCGCGG GGCTGCACCC
GGGATCTCGG ACTGGATCGT GATGGCCGTG CTGGGCCTGG CCTATGTGCT GATGGTGCGT
GTCTCGGCCC GCCGGCCCGA TCTCGCGCTC GACGATCCGA ACGCGCGCCA GATCCGGCTC
CCCGCGGTGG CCGAGGTCTT CCCGACCGGC CTGCATTACC TGCTGCCGAT CCTCGTCCTC
GTCTGGTTCC TGATGATCGA GATGCAGTCG CCCGGCAAGT CGGCCTTCTA CGCCGTGGCG
GTCATGATCT TCATCATCGT GACCCAGCGG CCGCTGAAGG CTTTGTTCCG CGGCGAGGAT
GTGGGGCAGG CCTTCGGCGC GGGCTTCGGC GACCTGATCG AGGGCATGAT CGCGGGCGCG
CGCAACATGA TCGGCATCGG CGTCGCCACC GCGGCGGCGG GCATCATCGT GGCGACCGTG
ACCAAGACCC CGATCGGCAC CGAACTGGCC GGCCTCGTCG AGATGCTCTC GGGCGGCAAC
CTCTTCATCA TGCTGCTGCT CGTGGGGCTC TTCTCGCTGA TCCTCGGGAT GGGGCTGCCC
ACGACGGCCA ACTACATCGT GGTCTCCTCG CTGATGGCCT CGGTCGTGGT CTCGCTCGGC
GCGCAGGAGG GGCTGATCGT GCCGCTGATC GCGGCGCATC TCTTCGTCTT CTACTTCGGC
ATCATGGCCG ACGTGACCCC GCCCGTGGGC CTCGCGAGCT TCGCTGCCGC GGCCGTCTCG
GGAGGGGATC CGATCCGCAC CGGGATCACC GCCTTCTTCT ATTCGCTGCG GACGGCGGCG
CTGCCCTTCC TCTTCATCTA CAACCCGACG CTGATCCTCT ATGGCGTCGA TCTGGGGACA
TGGGCGGGCA TCCTGCAGGC CGTGGGCGTC TTCGCGGTGG CGACGGTGGC GATGCTCCTC
TTTGCCGCCG CGACCCAGGG CTACTTCCTC GCGCCCTCGC GGCTGTGGGA GAGCGCGGCG
CTCCTTCTCG TGGCCTTCAC GCTCTTCGTG CCGGGCTTCT GGCTCGACCG GATCCTGCCG
CGCTTCGAGG AACGCCCGCC GACCGAGCTT GCCCAGGCCT TCGATGCGGC CGAACCCGGC
GAGACGGTGC GCTTCGTGGT GCAGGGCCCG GACTTCGCCA CCGGTCGGCC CACGCGGCTG
ACGATGGTCC ACACGGTCGA AGCCGAGGCG CCGGCCACGG GACGGGCGGA GGCGGCCGGG
CTTCGACTTC TACGGCACCG AACGGGTCGA GGTCTCGTCG CTGCAAAGCC CCGCGCACCG
GCCGCCGAAG CAGCTCTTCT ACATTCCGGC GCTGCTGCTT CTGGGGCTCG TCATCGCGCT
TCAGCGACGA CGGCAGACCA AGCCCGCCTT CTGAGCGCGC ACCAAGGAGG AGACCATGGC
CAGAACCATC CTGCTGCCCA TCGATCTGGG TAA
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| Protein sequence | MTDETQPKSR SFTDEELQDL VASTDSGGRN PSNRTVAILI AATAFLWSLF QLWIAQPQLW
FGQYLPVLNS SQTRPIHLTF AILLAFLAYP ALKSSPRDRV PILDWVLALA GAGCAFYVFL
YSRELAATAR AGLPTQTQIV VGAVGIVLLL EASRRALGPA LTVVGAIFLL YAWVGQGWLI
PDIIAHSGLS FTSIINAQWL DTNGVFGIPL GVSTAFVFLF VLFGALLDKA GAGNYFIQLA
FAGLGALRGG PAKAAVVGSA MTGLISGSSI ANVVTTGTFT IPLMKRVGFS SEKAGAVEVA
SSVNGQIMPP VMGAAAFLMV EFVGISYVEV IKHAFIPAVI SYIALVYIVH LEALKQDMPA
LGPAANLGRM FAKIAVGFVV TGAAFTGLVW AIQALRGAAP GISDWIVMAV LGLAYVLMVR
VSARRPDLAL DDPNARQIRL PAVAEVFPTG LHYLLPILVL VWFLMIEMQS PGKSAFYAVA
VMIFIIVTQR PLKALFRGED VGQAFGAGFG DLIEGMIAGA RNMIGIGVAT AAAGIIVATV
TKTPIGTELA GLVEMLSGGN LFIMLLLVGL FSLILGMGLP TTANYIVVSS LMASVVVSLG
AQEGLIVPLI AAHLFVFYFG IMADVTPPVG LASFAAAAVS GGDPIRTGIT AFFYSLRTAA
LPFLFIYNPT LILYGVDLGT WAGILQAVGV FAVATVAMLL FAAATQGYFL APSRLWESAA
LLLVAFTLFV PGFWLDRILP RFEERPPTEL AQAFDAAEPG ETVRFVVQGP DFATGRPTRL
TMVHTVEAEA PATGRAEAAG LRLLRHRTGR GLVAAKPRAP AAEAALLHSG AAASGARHRA
SATTADQARL LSAHQGGDHG QNHPAAHRSG
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