| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3480 |
|---|
| Symbol | |
|---|
| ID | 4898692 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | - |
|---|
| Start bp | 558125 |
|---|
| End bp | 559453 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640114078 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001045345 |
|---|
| Protein GI | 126464232 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.634829 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGGAC ATATCTTCGG CCGCTCCACC CGGGGCAGCC TTCCCGTCGC CGCTGAGGGC
GAGGGCTGCT ACATCCTCGA TGCCGAGGGC CGGCGCTATC TCGACGGGTC GGGCGGGGCG
GCGGTCTCCT GCCTCGGCCA TTCCAACGCG GCGGTGCGCG CGGCGCTCCA CGACCAGCTG
GACCGGCTGG CCTTCGCCCA TACCGGCTTC TTCACCTCCG AACCGGCCGA GCGTCTGGCC
GACCGGCTGG CGGCGGCGGC CCCCGAGGGG ATCGAGCGGG TCTATCTCGT CTCGGGCGGA
TCCGAGGCGG TCGAGGCGGC GCTGAAGCTC GCGCGGCAGT ATTTCATGGA AGTGGGCCAG
CCCGGCCGGC ACCGGGTGAT CGCGCGCCGG CAGAGCTACC ACGGCAACAC CCTCGGCGCG
CTGGCCGCAG GCGGCAACGA ATGGCGCCGG GCCCAGTTCG CGCCGCTTCT GGTCGAGACC
TCGCATGTCT CGCCCTGCTA CGAATATCGC GGCCGGGCCG AGGACGAGAG CCTCGAGGCC
TACGGGCTGC GGGTGGCCGA CGAGCTGGAG GCCGAGATCC AGCGCCTCGG TCCCGAGACG
GTGATGGCCT TCGTGGCCGA GCCGGTGGTG GGGGCCACGG CGGGCGCGGT GCCGGCCGTG
CCGGGCTATC TCAAGCGCAT CCGCGAGATC TGCGACCGGC ACGGGGTGTT GCTCATTCTC
GATGAGGTCA TGTGCGGGAT GGGCCGGACG GGCCATCTCT TCGCCTGCGC CGAAGATGGC
GTGGCGCCCG ACATGATCAC CATCGCCAAG GGTCTGGGCG CGGGCTACCA GCCCATCGGC
GCGCTTCTGG TGCAGGGCCG CCTCTACGAC GCCATCGCCG CGGGCTCGGG CTTCTTCCAG
CACGGCCACA CCTACATGGG CCATGCGATG GCCGCCGCCG CGGCCAATGC GGTGCTGGAC
GAGATCGAGG GCCGCGATCT CCTGCAGGCG GTCCGGCGGC AGGGCGCGCG GCTCGAGGGG
CTCCTGCAGG AGCGGCTGGG CCAGCATCCC CATGTGGGCG ACATCCGCGG CCGCGGTCTC
TTCCGCGGCA TCGAGCTGGT GGCCGACCGC GAGACGAAGG AGCCGTTCGA TCCGGCACGG
AAGCTCCATG CCCGGATCAA GGCCGAGGCC TTCGCGGGCG GCCTCATCTG CTATCCGATG
GGCGGCACTC TCGACGGGGT GCGGGGCGAC CATATCCTGC TCGCGCCGCC CTTCATCATC
TCCAATGCCG AACTCGAGGA GCTGGTGGAC AAGCTCTCGG GCGCGCTCGA CCGCGCCCTC
GCGGCATGA
|
|---|
| Protein sequence | MPGHIFGRST RGSLPVAAEG EGCYILDAEG RRYLDGSGGA AVSCLGHSNA AVRAALHDQL
DRLAFAHTGF FTSEPAERLA DRLAAAAPEG IERVYLVSGG SEAVEAALKL ARQYFMEVGQ
PGRHRVIARR QSYHGNTLGA LAAGGNEWRR AQFAPLLVET SHVSPCYEYR GRAEDESLEA
YGLRVADELE AEIQRLGPET VMAFVAEPVV GATAGAVPAV PGYLKRIREI CDRHGVLLIL
DEVMCGMGRT GHLFACAEDG VAPDMITIAK GLGAGYQPIG ALLVQGRLYD AIAAGSGFFQ
HGHTYMGHAM AAAAANAVLD EIEGRDLLQA VRRQGARLEG LLQERLGQHP HVGDIRGRGL
FRGIELVADR ETKEPFDPAR KLHARIKAEA FAGGLICYPM GGTLDGVRGD HILLAPPFII
SNAELEELVD KLSGALDRAL AA
|
|---|
| |