| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3401 |
|---|
| Symbol | |
|---|
| ID | 4898253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | - |
|---|
| Start bp | 455163 |
|---|
| End bp | 455864 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640113998 |
|---|
| Product | GntR domain-containing protein |
|---|
| Protein accession | YP_001045266 |
|---|
| Protein GI | 126464153 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2186] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.334761 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAAC GCCGTGACAG CCTGGCATCC GTCGTCGCCC GGGATCTGGC CGGGCGCATC
GAGCGTGGCG ACTACGCCGT GGGCGACAAG ATCCCCATCG AGGCGCAGCT GTGCGAGATG
TACAACGTGA GCCGGACCGT GGTGCGCGAG GCCATCGCGA CCTTGCGATC CGAGGGGCTG
GTGACATCGC GCCACGGCGT CGGCGTGTTC GTCGAGGAGC GCGGCAATCC GGCGCTGTCG
ATCACCCGGG AGGCGGCGGG CGAGCTCTCG GAGGTGCTCG AACTGCTCGA GCTCCGGCTC
GGGGTCGAGG TCGAGGCCGC CGGCCTTGCG GCCCGGAGGG CCACCGCGGA AGACCTGCGC
CAGATCCGCG AGGTGCTCGA GAAGACGGAC GATCTCGAGG CCTTCGCCGA GCACCGGCGC
GAGCTGGACT ATGCCTTCCA TCTGGCGATC GCGCGGGCGA GCGGGAACAG CTGGATGCCG
AAGTTCATGG ATTTCATCGG CCCCGTCATC ATTCCGCGCA GCCAGCTTCT GCACGACCCG
CAATCGGGAA TCACCCGCGA CTACCTGCGC CAGATGGTCG AGGAGCACCG GCAGATCGTC
GAGGCCATCG CCGCGGGCGA CGCGGCCGCG GCGCAGGAGG CGATGCGGAT GCATCTCTCC
ACCTCGCTGG AGCGCTACCG TCGCCGGCTG ACCGACGCAT AA
|
|---|
| Protein sequence | MRKRRDSLAS VVARDLAGRI ERGDYAVGDK IPIEAQLCEM YNVSRTVVRE AIATLRSEGL
VTSRHGVGVF VEERGNPALS ITREAAGELS EVLELLELRL GVEVEAAGLA ARRATAEDLR
QIREVLEKTD DLEAFAEHRR ELDYAFHLAI ARASGNSWMP KFMDFIGPVI IPRSQLLHDP
QSGITRDYLR QMVEEHRQIV EAIAAGDAAA AQEAMRMHLS TSLERYRRRL TDA
|
|---|
| |