| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3398 |
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| Symbol | |
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| ID | 4898289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | - |
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| Start bp | 452064 |
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| End bp | 453059 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640113995 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_001045263 |
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| Protein GI | 126464150 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.586433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGA TCCACGGCCT TCTGGCCGCC GCCCTTCTTG CGACTGGCGC ACAGGCGCAG
GACTACAGCA GCCGCACCAT CAAGTTCGCC GCCACCGGTC AGGAAGGTAC GCCGCCGGTG
CAGGGCATGC ATATCTTCGC GCAGAAGCTC GAGGAGCAGA GCGGCGGCAA GCTGAAGACG
CGCGTCTTCG CCAATGGCGT GCTGGGCGGC GATGTGCAGG TGCTGTCGTC GCTTCAGGGC
GGCGTGGTCG AGATGATGGT CTGGAACGCC GGCAACATGA TGACCCAGGC GCAGGATTTC
GGCATCCTCG ATCTGCCCTT CATCTATCAG GACGAAGAGG TGATGGATAC GCTGCTCGAC
GGCGAAGTCG GCAGGAAGCT CACCGATCAG CTGCCCGAGC ATGGCGTGAT CGGCCTGTCC
TTCTGGGAAC AGGGCTTCCG CCAGCTGACC AACGACACCC GCGAGGTGCA CAGGCTCGAG
GATATTGCGG GCCTCAAGGT CCGCGTGCAG CAGAACCCGC TGCTCGTCGA CATGTGGAAG
GCGCTTGGCG CCAATCCCAC GCCGATGGCG GTGACCGAAC TCTACACCGC GCTCGAGACC
GGCGCCGTGG ACGGGCAGGA ATGCACCGCG CCCTTCGCTC TCACCGCGAA ATATACCGAG
GTGCAGAAAT ATCTCTCGGT CACCCGCCAC AACTACAATC CGCAGATCGT GCTGATCGGC
AAACCCTTCT GGGACAAGCT CACCGACGAT GAAAAGGCCC TGATCCAGAA GGTCGCGCAG
GAGACTGCGG TCGAACAGCG CCGCATTTCG CGCGCGGCGC AGGACAGCGC GCTGGAGGAG
ATCCGGGCGG CTGGCAATGT CGTGACCGAG ATCACCCCCG AAGAGCTCGC CCGCATGCAG
GAGGCCGTCG CCCCGGTCAT CCGCACCTAT GCACAGACCT TCGATCCCGA GCTCGTGCGC
ACCGTCTTCG ATGCGGTCGG CTTCTCGCTG GATTGA
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| Protein sequence | MKLIHGLLAA ALLATGAQAQ DYSSRTIKFA ATGQEGTPPV QGMHIFAQKL EEQSGGKLKT
RVFANGVLGG DVQVLSSLQG GVVEMMVWNA GNMMTQAQDF GILDLPFIYQ DEEVMDTLLD
GEVGRKLTDQ LPEHGVIGLS FWEQGFRQLT NDTREVHRLE DIAGLKVRVQ QNPLLVDMWK
ALGANPTPMA VTELYTALET GAVDGQECTA PFALTAKYTE VQKYLSVTRH NYNPQIVLIG
KPFWDKLTDD EKALIQKVAQ ETAVEQRRIS RAAQDSALEE IRAAGNVVTE ITPEELARMQ
EAVAPVIRTY AQTFDPELVR TVFDAVGFSL D
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