Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3359 |
Symbol | |
ID | 4898941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | + |
Start bp | 409800 |
End bp | 411290 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640113958 |
Product | lambda family phage portal protein |
Protein accession | YP_001045227 |
Protein GI | 126464114 |
COG category | [R] General function prediction only |
COG ID | [COG5511] Bacteriophage capsid protein |
TIGRFAM ID | [TIGR01539] phage portal protein, lambda family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.591009 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGGGA CCTTCCTGCG CCGGCTCGGC GCCTGGGTCG GCGGGTTCGA TGCGGGCCTC GCCAACCGGC GCCTGCGCGG CTTCCGCCCC GCACGCGCCC ATGTGAATGC GCTTCTCGCC GCGGCCGGCC CCGACATGAA CGCCCGCGCG CGCTACCTCG TGCGCAACAA CGGCTATGCC CAGGGCGCGC TCGACAGCTG GGCCGCGAAC ACGGTCGGCA CCGGGGTGAA GCCCTCCTCG CTCATCGCGG CGCCGGCGCG GAAGGCAGCC CTCCAGCGGC TCTGGCAGGA CTGGACCGAC GAGGCGGATG CCGAGGGCGT GACCGACTTC TACGGCCTGC AGCGCCGCAT CGCGCGCGAG TTCTTCCTCA CGGGCGAATG CTTCGTGCGC CTGCGCGCGC GGAGGCCCGG CGACGGGCTC ACGGTGCCGC TCCAGCTCCA GTGCCTGCCC TCCGAGATGC TGCCGATCGG CCGGACCGAG GTGCTGGGCG GCGGGCGCGC GATCCGGCAG GGGATCGAGT TCGACGCGGT GGGCCGGCGG GTGGCCTATC ACTTCCATCG CCGCCATCCG GGCGATCCGA CCGAGCCGGG GCTTGCGGGC GAGACGGTGC GCGTGCCGGC CGAGGATGTG CTCCACATCG TCGATCCGGT CGAGAGCGGC CAGCTCCGCG GCGTCTCGCG CTTCGCGCCC GCCATCGTGA AGCTCTTCCT GCTCGATCAG TACGACGATG CCGAACTCGA CCGGAAGAAG GTCGCGGCCA TGTATGCGAT GTTCATCACC TCGAACGATC CGGATGCGGC GCCGCTCGAG GGCGAGCTGG GCGATCAGGT GGCGCCGGGG CAGATCGTGC GTCTCGACCC GGGCGAGGAC ATGAAGGTGG CCGATCCCGC GGACTCGGGC GCGACCTACG AGCCGTTCCA GTACCGCACG CTCCTGCAGG TCTCGGCCGC GCTCGGGATC CCCTACGCCC ATCTCTCGCA GGACATGGTG AAGGCGAACT ATTCCAATGC CCGCACCGCG CTCATGGAAT TCCGCCGCCG GGTCGAGGCC TTCCAGCATT CGGTCCTCGT CTATCAGCTC TGCCGTCCGG TCTGGGCGCG CTTCACCGAT CTCGCGGTGC TGACCGGAGC GGTGCGGCTG CCGGGCTATG AGCGCCGGAG GCGGGACTAT CTCGCCTGCG AGTGGCTGCC GCCGAAGTGG CAATGGGTCG ATCCGCTGAA GGACATCCGC GCCGAGATCG AGGAGATCGG CGCGGGCCTC AAAAGCCGGT CGCAGGCGAT CGGGGAGCGC GGCTACGACG CCGAGGAGGT CGATCGCCAG ATCGCCGCCG ACCGCAAGCG CGAGGGGCGG CTCGGGCTCG ACTTCCGCCG CAGCGCGCAG GGCTCCTCCG CACCTGCGGC GCAGGACGGG GCGCGCGCCG ACGAGGAGGA CGACGAGGAT GACGACGGCC GCGCGGCGGA CCGCGACGCC GGCAGGAGGG CAGAGCCATG A
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Protein sequence | MAGTFLRRLG AWVGGFDAGL ANRRLRGFRP ARAHVNALLA AAGPDMNARA RYLVRNNGYA QGALDSWAAN TVGTGVKPSS LIAAPARKAA LQRLWQDWTD EADAEGVTDF YGLQRRIARE FFLTGECFVR LRARRPGDGL TVPLQLQCLP SEMLPIGRTE VLGGGRAIRQ GIEFDAVGRR VAYHFHRRHP GDPTEPGLAG ETVRVPAEDV LHIVDPVESG QLRGVSRFAP AIVKLFLLDQ YDDAELDRKK VAAMYAMFIT SNDPDAAPLE GELGDQVAPG QIVRLDPGED MKVADPADSG ATYEPFQYRT LLQVSAALGI PYAHLSQDMV KANYSNARTA LMEFRRRVEA FQHSVLVYQL CRPVWARFTD LAVLTGAVRL PGYERRRRDY LACEWLPPKW QWVDPLKDIR AEIEEIGAGL KSRSQAIGER GYDAEEVDRQ IAADRKREGR LGLDFRRSAQ GSSAPAAQDG ARADEEDDED DDGRAADRDA GRRAEP
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