Gene Rsph17029_3317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3317 
Symbol 
ID4898270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp375624 
End bp376463 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content69% 
IMG OID640113916 
Productpeptidase S14, ClpP 
Protein accessionYP_001045185 
Protein GI126464072 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.13528 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGC GCGACCTGCC GAAGGCCGAA GTCTCGGCCA AGCCCGGTAT CCGGAGCGAT 
GTGAACGTGA AGGCGCTGCA GCGCTGGAAC CCCGATGTTC GATCGGCCGC CGAAGAGGGC
GATGCCAGCA TCTCGATCCT CGAGGTGATC GGGCAGGACT TCTGGGGCGA CGGCGTGACG
GCCAAGCGGA TCAGCGGGGC GCTGCGCGCA ATCGGCGACC GGGATGTGGT GGTCAACATC
AACAGCCCGG GCGGGGACTT CTTCGAGGGC CTCGCGATCT ACAACGCGCT GCGCGAGCAT
CCCGCGAAGG TGACGGTGCG GGTGCTGGGT GTCGCCGCCT CGGCCGCCAG CGTCATCGCC
ATGGCGGGCG ACGAGATCCG CATCGCCCGG GCGGGCTTCC TGATGATCCA CAACACCTGG
GTGCTCGCGG CCGGTGACCG CCATGCGCTG ACGGAGGTGG CGCAGTGGCT CGAGCCCTTC
GATGCCGTCT CGGCCGACAT CTATGCGGCG CGCAGCGGGA TCGACGCAAA GAAGATCGCG
GCCATGCTCG ACCGGGAGAC GTGGATCTCG GGCGGCCAGG CGGTGGAGCA GGGCTTCGCG
GACGGGCTGC TGTCGGCGGA CGAGCTGGAC CTGTCCGATG CCGACGAGGG GCGGGCCTCC
GCCCGCGCCG AAAGGAAATT CGACGTCCTC GCCAGCAAGG CGGGGGTCTC ACGCTCTGAG
GCGCGCGAGC TGCTCGCCGC CCTGAAGGGG AGCAAGCCGG GCGCTGCTCC TGCCAGCATG
CATGACGCTG CGGTCGCTGC GGAGGTGCGG AACCTCCTGA ACTTCGCGAA AACCATCTGA
 
Protein sequence
MSMRDLPKAE VSAKPGIRSD VNVKALQRWN PDVRSAAEEG DASISILEVI GQDFWGDGVT 
AKRISGALRA IGDRDVVVNI NSPGGDFFEG LAIYNALREH PAKVTVRVLG VAASAASVIA
MAGDEIRIAR AGFLMIHNTW VLAAGDRHAL TEVAQWLEPF DAVSADIYAA RSGIDAKKIA
AMLDRETWIS GGQAVEQGFA DGLLSADELD LSDADEGRAS ARAERKFDVL ASKAGVSRSE
ARELLAALKG SKPGAAPASM HDAAVAAEVR NLLNFAKTI