| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3292 |
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| Symbol | |
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| ID | 4898312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | + |
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| Start bp | 355855 |
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| End bp | 357153 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640113890 |
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| Product | RNA polymerase, sigma 54 subunit, RpoN |
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| Protein accession | YP_001045160 |
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| Protein GI | 126464047 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0316034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCCC GCCAGCGCAT CAGTATCGCC CAGACCCAGA GGCTGCAGCT CAATCTCGGC
CTCACCGCCT CGATCCGCGT CCTGAATTCC GATGCCGAGG GTCTCACGCG CTACCTGCAG
GAGCAGGCGG CGGAGAACCC CCATATCCAG CTCGAGCCGG CGACCTCGAC CGACTGGCTG
CCGCGCTGGA CGAGCGTTCT CTCGCGCCTC GCGCAGGGCG AGGGGTCGAC GGGCGGAGAG
ACGGTGGCGG CGGCGGGGCC GAGCCTCATG GCGCATGTGA TGGCGCGCAT CGACACGCTT
TATCCGCGCG GACCCGAGCG GCGGATCGCG ATCCTTCTGG CCGAGGCGCT GGAGCCCACC
GGCTGGCTCG GGACCGGGAC GGACGAGATT GCCCGGCAGG CCCGCGTCCC CTCCGCCGAG
GTCGCGGCGG TGCTGGCCGG GCTGCAGAAG ATCGAGCCCG CCGGCCTTTT CGCCCGAAAC
CTCGCCGAGT GCCTGCGGCT TCAGGCCATC GAGGCCGAGC GGCTCGATTC CACCCTGAGC
TGCCTTCTCG ACCATCTCGA CCTCGTGGCA CAGGGGGCCC TCGGGCGGCT CGCGCGGCTC
TGCAACACGG ACGAGGCCGG GGTGACCGCG TGCCTGCGGC TCCTGCGGAC CTTCGACCCG
AAGCCCGGCG CGCAGTTCGA TCCGGGCGCG GCGCCGGTGC GCGAGCCCGA CCTGATCGCG
ACGAAGGGCG AGGCCGGGTG GGAGGTGTCG CTGAACCGCT CGGCCATGCC CACGGTGCAG
ATCCGCAAGC CGGACAAGCG CCCGACGACG CCGGCCGCCC GCGCGGCCTG GACCCAGGCG
CAGGCGGTGG GCCGGATGAT CGAGAACCGC AATGCCACGC TCCTGAGGGT CGCGCGCGAG
ATCCTCGCCC GGCAGGAGGC GGCGCTCGAC GAAGGTCCCT CGGCGCTCGT GGCCCTGACC
ATGACCGAGG TGGCCGAGGC GCTCGGCATC CACGAGAGCA CGGTAAGCCG CGTGGTCGCG
GGCACCTGCG TGGACACGCC GCGCGGCACC TGGTGGCTGC GGCGCATGTT CAGCGGCCGC
CTTGCCGAGG GCGGCCCCTC GGCCGCGGCC ATCCGCGCGG CCATCGCCCG CCTCGTCGCG
CAGGAAGATC CGGCCGCGCC TTTGTCCGAC GGCGCTCTGG TCGAGGCGCT GGCGGCCGAG
GACATGCAGC TGGCGCGCCG CACCGTCGCC AAATATCGCG AGATGCTGAA CATTCCGCCC
GGACACCGCC GCCGCCGCAG GCCCTCGCGC TCGGCCTGA
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| Protein sequence | MKSRQRISIA QTQRLQLNLG LTASIRVLNS DAEGLTRYLQ EQAAENPHIQ LEPATSTDWL
PRWTSVLSRL AQGEGSTGGE TVAAAGPSLM AHVMARIDTL YPRGPERRIA ILLAEALEPT
GWLGTGTDEI ARQARVPSAE VAAVLAGLQK IEPAGLFARN LAECLRLQAI EAERLDSTLS
CLLDHLDLVA QGALGRLARL CNTDEAGVTA CLRLLRTFDP KPGAQFDPGA APVREPDLIA
TKGEAGWEVS LNRSAMPTVQ IRKPDKRPTT PAARAAWTQA QAVGRMIENR NATLLRVARE
ILARQEAALD EGPSALVALT MTEVAEALGI HESTVSRVVA GTCVDTPRGT WWLRRMFSGR
LAEGGPSAAA IRAAIARLVA QEDPAAPLSD GALVEALAAE DMQLARRTVA KYREMLNIPP
GHRRRRRPSR SA
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