Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3286 |
Symbol | |
ID | 4898850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | - |
Start bp | 348996 |
End bp | 349622 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640113884 |
Product | GDSL family lipase |
Protein accession | YP_001045154 |
Protein GI | 126464041 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2755] Lysophospholipase L1 and related esterases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTGG CCCTCGTCTT CTCGGCCATG CCTGCCGCCG CGGCCGAGGA GGTCACGGTG CTGGCGCTCG GCGACAGCCT GACGGCGGGC TACGGCCTGC CCGAGGGCGA GGGCTTCGTG CCGCAAATGC AGCAATGGCT GCGGGAGCAT GGCGAGAGCG TCTCGCTGGT GAATGCCGGC GTCTCGGGCG ACACGACGGC GGGCGGCCGC GCGCGGCTCG ACTGGAGCCT GACGCCCGAG GTCGATGCCA TGATCGTGAA CCTTGGCGGT AACGACATGC TGCGCGGCCT CGATCCGGCG CTGACGCGCG GGAACCTCGA GGCGATCCTG AAGACGGCCG AGGACCGCGG GCTGCCGGTG CTTCTGGTCG GGCTCGCGGC GCCGGGCAAT TACGGCCCCG ACTTCAAGCG GTCGTTCGAT GCGATCTTTC CCGGTCTGGC CCAAAGCTAC GGCGCGGATC TGGAACCGAA CTTCTTCGCC GCCCTTGCCG CACGGCTGGA CGAGCCCGAC GCGCGTCAGC GCTACATGCA GCCCGACGGC ATCCATCCGA GCGCCGAGGG CGTGGCCGTG ATCGTCGAGG AGATGGGGCC GCGCGTGCAG GCGCTGGTCG AGCGTGCGCG GCAGTAG
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Protein sequence | MALALVFSAM PAAAAEEVTV LALGDSLTAG YGLPEGEGFV PQMQQWLREH GESVSLVNAG VSGDTTAGGR ARLDWSLTPE VDAMIVNLGG NDMLRGLDPA LTRGNLEAIL KTAEDRGLPV LLVGLAAPGN YGPDFKRSFD AIFPGLAQSY GADLEPNFFA ALAARLDEPD ARQRYMQPDG IHPSAEGVAV IVEEMGPRVQ ALVERARQ
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