Gene Rsph17029_3286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3286 
Symbol 
ID4898850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp348996 
End bp349622 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content71% 
IMG OID640113884 
ProductGDSL family lipase 
Protein accessionYP_001045154 
Protein GI126464041 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTGG CCCTCGTCTT CTCGGCCATG CCTGCCGCCG CGGCCGAGGA GGTCACGGTG 
CTGGCGCTCG GCGACAGCCT GACGGCGGGC TACGGCCTGC CCGAGGGCGA GGGCTTCGTG
CCGCAAATGC AGCAATGGCT GCGGGAGCAT GGCGAGAGCG TCTCGCTGGT GAATGCCGGC
GTCTCGGGCG ACACGACGGC GGGCGGCCGC GCGCGGCTCG ACTGGAGCCT GACGCCCGAG
GTCGATGCCA TGATCGTGAA CCTTGGCGGT AACGACATGC TGCGCGGCCT CGATCCGGCG
CTGACGCGCG GGAACCTCGA GGCGATCCTG AAGACGGCCG AGGACCGCGG GCTGCCGGTG
CTTCTGGTCG GGCTCGCGGC GCCGGGCAAT TACGGCCCCG ACTTCAAGCG GTCGTTCGAT
GCGATCTTTC CCGGTCTGGC CCAAAGCTAC GGCGCGGATC TGGAACCGAA CTTCTTCGCC
GCCCTTGCCG CACGGCTGGA CGAGCCCGAC GCGCGTCAGC GCTACATGCA GCCCGACGGC
ATCCATCCGA GCGCCGAGGG CGTGGCCGTG ATCGTCGAGG AGATGGGGCC GCGCGTGCAG
GCGCTGGTCG AGCGTGCGCG GCAGTAG
 
Protein sequence
MALALVFSAM PAAAAEEVTV LALGDSLTAG YGLPEGEGFV PQMQQWLREH GESVSLVNAG 
VSGDTTAGGR ARLDWSLTPE VDAMIVNLGG NDMLRGLDPA LTRGNLEAIL KTAEDRGLPV
LLVGLAAPGN YGPDFKRSFD AIFPGLAQSY GADLEPNFFA ALAARLDEPD ARQRYMQPDG
IHPSAEGVAV IVEEMGPRVQ ALVERARQ