Gene Rsph17029_3253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3253 
Symbol 
ID4899191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp320602 
End bp321645 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content71% 
IMG OID640113851 
Productperiplasmic solute binding protein 
Protein accessionYP_001045121 
Protein GI126464008 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4531] ABC-type Zn2+ transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0556768 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTATA CCATATCAGT CGCTCTCGCC AGCCTGCTCG CGGGCCCGGC CCTGGCAGAG 
GTGCCGCGCG TGGTGACGGA CCTGCCGCCG GTCCATTCGC TGGTGGCGCA GGTGATGGGC
GATCTCGGAG AGCCGGACCT CCTGCTGGGC CAGGGAGCGG ATCCGCATTC CTTCCAGCTG
CGCCCGAGTC AGGCGCGCGC GCTGGCCAAT GCCGATCTGG TGGTCTGGAT CGGACCGGAG
ATGACCCGCT GGCTCGAGCG CGCGCTTGAG GGCCGCAAGG GCGAGGAGCT GCGTCTCATG
CAGGTCGCGG GCACGCATCT GCAGGACTTC GGCGAAGGCG CGGCACACGA CCATGCTGGG
CACGGCCACG ACCATGCGGA CGAGGGCCAC GAGCATGCCG GCGAAGGACA CGATCACGCG
GACGAGGGCC ACAACCACGG CGACGAAGCG CACGATCACG CGGACGAGGA CCACAACCAC
GCCGGCGAAG CGCACGATCA CGGCGAACAT GAGGGCCACA GCCATACGGG CCTCGACCCC
CATGCCTGGC TCGATCCCGA GAATGCGCAG CTCTGGCTGA CGGCTGTCGC GCGCGAACTG
GGCCACCTCG ATCCCGAGAA TGCGGCGACC TACGCCGCCA ATGCCGAGGC CGCCCGGGCA
GCGCTGGCCG AGCTCGACCG CGAAACGGCC GCAAGGCTGG ACGAGGCGCG GAACCAGCCC
TTCTACGTCT TCCACGACGC CTACGGCTAT TTCGCAGGCC ACTACGGGCT GACCGTGCAG
GGCAGCGTCT CGGCAGGCGA TGCGGCCGCG CCGGGGGCGG CGCATCTCGC GGACCTGCGC
GCGGAGATGG CGGGCACCCC GCGCTGCATC TTCCCCGAGG CGCAGCATGA CGCGAAGCTC
GCCCGGCAGA TCGCGCAGGA GACGGGCGCG AAGGCCGGCC CGGCGCTCGA TCCGTCGGGC
AGCACGCTCG AGCCGGGCCC GCAGCTCTAC GCGAACCTGA TCCGCGGCCT CGCCGACGGC
ATCCTGTCCT GCGTCGCCCC TTGA
 
Protein sequence
MRYTISVALA SLLAGPALAE VPRVVTDLPP VHSLVAQVMG DLGEPDLLLG QGADPHSFQL 
RPSQARALAN ADLVVWIGPE MTRWLERALE GRKGEELRLM QVAGTHLQDF GEGAAHDHAG
HGHDHADEGH EHAGEGHDHA DEGHNHGDEA HDHADEDHNH AGEAHDHGEH EGHSHTGLDP
HAWLDPENAQ LWLTAVAREL GHLDPENAAT YAANAEAARA ALAELDRETA ARLDEARNQP
FYVFHDAYGY FAGHYGLTVQ GSVSAGDAAA PGAAHLADLR AEMAGTPRCI FPEAQHDAKL
ARQIAQETGA KAGPALDPSG STLEPGPQLY ANLIRGLADG ILSCVAP