Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3250 |
Symbol | |
ID | 4898276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | - |
Start bp | 318539 |
End bp | 319321 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640113848 |
Product | ABC-3 protein |
Protein accession | YP_001045118 |
Protein GI | 126464005 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.161789 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGACG ACTTCCTCAT CCGCGCGGCG CTCGCGGGCA TCGGCGTGGC GTTGGCGGCG GGGCCGCTCG GCGCCTTCGT CGTCTGGCGC CGCATGGCCT ATTTCGGCGA CGCGACCTCG CATGCCGCCA TCCTCGGTGT GGCGCTGGCG CTCGCCACCG AACTGCCGGT GGGGCTCGGC ACGCTCGCCG TGGCGCTGGT CATGGCCGCG ACCGTAGCCA CCTTGAGCGG CCGCGGCTGG GCCATGGACA CGATGCTGGG CGTGCTCGCC CATTCCGCGC TGGCCTTCGG CCTCGTCGCG GTGAGCTTCC TGCCCTCGGT GCGCACCGAT CTCTCGGCCT GGCTCTTCGG CGACATCCTC GCCGTCTCGG TGCCGGATCT GGCCTTCATC TGGGCGGGAG CGGCGCTCGT GCTGGCGCTT CTCCTCTGGC GCTGGTCGGC GCTTCTCACG GCCACGATCA ACGAGGATCT GGCCGCGGCC TCCGGCATCG ACCCCGCGCG CGAGCGGCTG ATTCTCACCC TCGCGCTCGC GGTGACGGTG GCGGTCGCGC TGAAGGTGGT GGGGGCGCTC CTGATCTCGG CCATGCTCAT CATCCCGGCC GCGGCCGCGC GCGGCCTGGC CCGCAACCCC GAGCCGATGG CGCTGCTCGC GGCCCTGATC GGCGCGGGCG CAAGCCTCGC GGGCCTTGGC GCCTCGCTGG CCTTCGACAC GCCGGCAGGC CCCTCGATCG TCGCGGCTGC GGCGCTGGCC TTCCTCGTCT CGGCGCTCCT GCGGCGCGCC TGA
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Protein sequence | MLDDFLIRAA LAGIGVALAA GPLGAFVVWR RMAYFGDATS HAAILGVALA LATELPVGLG TLAVALVMAA TVATLSGRGW AMDTMLGVLA HSALAFGLVA VSFLPSVRTD LSAWLFGDIL AVSVPDLAFI WAGAALVLAL LLWRWSALLT ATINEDLAAA SGIDPARERL ILTLALAVTV AVALKVVGAL LISAMLIIPA AAARGLARNP EPMALLAALI GAGASLAGLG ASLAFDTPAG PSIVAAAALA FLVSALLRRA
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