Gene Rsph17029_3250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3250 
Symbol 
ID4898276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp318539 
End bp319321 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content74% 
IMG OID640113848 
ProductABC-3 protein 
Protein accessionYP_001045118 
Protein GI126464005 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.161789 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGACG ACTTCCTCAT CCGCGCGGCG CTCGCGGGCA TCGGCGTGGC GTTGGCGGCG 
GGGCCGCTCG GCGCCTTCGT CGTCTGGCGC CGCATGGCCT ATTTCGGCGA CGCGACCTCG
CATGCCGCCA TCCTCGGTGT GGCGCTGGCG CTCGCCACCG AACTGCCGGT GGGGCTCGGC
ACGCTCGCCG TGGCGCTGGT CATGGCCGCG ACCGTAGCCA CCTTGAGCGG CCGCGGCTGG
GCCATGGACA CGATGCTGGG CGTGCTCGCC CATTCCGCGC TGGCCTTCGG CCTCGTCGCG
GTGAGCTTCC TGCCCTCGGT GCGCACCGAT CTCTCGGCCT GGCTCTTCGG CGACATCCTC
GCCGTCTCGG TGCCGGATCT GGCCTTCATC TGGGCGGGAG CGGCGCTCGT GCTGGCGCTT
CTCCTCTGGC GCTGGTCGGC GCTTCTCACG GCCACGATCA ACGAGGATCT GGCCGCGGCC
TCCGGCATCG ACCCCGCGCG CGAGCGGCTG ATTCTCACCC TCGCGCTCGC GGTGACGGTG
GCGGTCGCGC TGAAGGTGGT GGGGGCGCTC CTGATCTCGG CCATGCTCAT CATCCCGGCC
GCGGCCGCGC GCGGCCTGGC CCGCAACCCC GAGCCGATGG CGCTGCTCGC GGCCCTGATC
GGCGCGGGCG CAAGCCTCGC GGGCCTTGGC GCCTCGCTGG CCTTCGACAC GCCGGCAGGC
CCCTCGATCG TCGCGGCTGC GGCGCTGGCC TTCCTCGTCT CGGCGCTCCT GCGGCGCGCC
TGA
 
Protein sequence
MLDDFLIRAA LAGIGVALAA GPLGAFVVWR RMAYFGDATS HAAILGVALA LATELPVGLG 
TLAVALVMAA TVATLSGRGW AMDTMLGVLA HSALAFGLVA VSFLPSVRTD LSAWLFGDIL
AVSVPDLAFI WAGAALVLAL LLWRWSALLT ATINEDLAAA SGIDPARERL ILTLALAVTV
AVALKVVGAL LISAMLIIPA AAARGLARNP EPMALLAALI GAGASLAGLG ASLAFDTPAG
PSIVAAAALA FLVSALLRRA