Gene Rsph17029_3248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3248 
Symbol 
ID4898117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp314933 
End bp315724 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content70% 
IMG OID640113846 
Productglycoside hydrolase family protein 
Protein accessionYP_001045116 
Protein GI126464003 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.226396 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.397621 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGAC GCCTCCTCGC CCTCGGCCTC GCCGCGCTGC TTCTGTCCTG CGGCCGGCCG 
GAGGTCATCG CCGAACTGCC TTCCGGCCAG ACCGTCACCG TCGCCCAGCC GAGCTTCGGC
GATGCCAAGC CCCACCCCTG GAGCGGCCGG GCGCCCTCGA GCTACCAGGT CCACGGGATC
GACGTCTCGC GCTTCCAAGG CCCGATCGAC TGGCCCACCG CCGCCTCGGC CGGCGTCTCC
TTCGCCTTCA TCAAGGCCAC CGAAGGCGGC GACCGGGTGG ATGCTGCCTT CCACGAGAAC
TGGCGCGGCG CCGGCCGCGC GGGTGTGCCA CGCGGCGCCT ACCATTTCTT CTATTTCTGC
CGCCCGGCCG CGGAACAGGC CGACTGGTTC ATCCGGACCG TGCCGAAGTC CCCCCGCGCC
CTGCCGCCGG TGCTTGACAT GGAATGGAAC CCCTTCTCGC CCACCTGCAC CTTCCGGCCC
GAGCCCGCGG TCGTCCGGGC CGAGGCGCTC ACCTTCCTGC GTCAGGTCGG GGCCCATTAC
GGCAGGCGCC CGATCATCTA TACGACGATC GACTTCTTCG AGCGCAACGA GATGTGGCGC
CTGACCGGAT ACGACTTCTG GCTCCGCTCG GTCGCCGCCC ATCCGCACGA GCGCTATGCC
GGCCATCCCT GGACCTTCTG GCAATATACC GGCACCGGGA TCGTGCCGGG CATCGGCAAG
GTCACCGACA TCAACGTCTT CAACGGCGAC GCCACCCGCT GGGCCGCCTG GCTCACGCTG
AACCTGCGCT GA
 
Protein sequence
MTRRLLALGL AALLLSCGRP EVIAELPSGQ TVTVAQPSFG DAKPHPWSGR APSSYQVHGI 
DVSRFQGPID WPTAASAGVS FAFIKATEGG DRVDAAFHEN WRGAGRAGVP RGAYHFFYFC
RPAAEQADWF IRTVPKSPRA LPPVLDMEWN PFSPTCTFRP EPAVVRAEAL TFLRQVGAHY
GRRPIIYTTI DFFERNEMWR LTGYDFWLRS VAAHPHERYA GHPWTFWQYT GTGIVPGIGK
VTDINVFNGD ATRWAAWLTL NLR