Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3248 |
Symbol | |
ID | 4898117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | + |
Start bp | 314933 |
End bp | 315724 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640113846 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001045116 |
Protein GI | 126464003 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.226396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.397621 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGAC GCCTCCTCGC CCTCGGCCTC GCCGCGCTGC TTCTGTCCTG CGGCCGGCCG GAGGTCATCG CCGAACTGCC TTCCGGCCAG ACCGTCACCG TCGCCCAGCC GAGCTTCGGC GATGCCAAGC CCCACCCCTG GAGCGGCCGG GCGCCCTCGA GCTACCAGGT CCACGGGATC GACGTCTCGC GCTTCCAAGG CCCGATCGAC TGGCCCACCG CCGCCTCGGC CGGCGTCTCC TTCGCCTTCA TCAAGGCCAC CGAAGGCGGC GACCGGGTGG ATGCTGCCTT CCACGAGAAC TGGCGCGGCG CCGGCCGCGC GGGTGTGCCA CGCGGCGCCT ACCATTTCTT CTATTTCTGC CGCCCGGCCG CGGAACAGGC CGACTGGTTC ATCCGGACCG TGCCGAAGTC CCCCCGCGCC CTGCCGCCGG TGCTTGACAT GGAATGGAAC CCCTTCTCGC CCACCTGCAC CTTCCGGCCC GAGCCCGCGG TCGTCCGGGC CGAGGCGCTC ACCTTCCTGC GTCAGGTCGG GGCCCATTAC GGCAGGCGCC CGATCATCTA TACGACGATC GACTTCTTCG AGCGCAACGA GATGTGGCGC CTGACCGGAT ACGACTTCTG GCTCCGCTCG GTCGCCGCCC ATCCGCACGA GCGCTATGCC GGCCATCCCT GGACCTTCTG GCAATATACC GGCACCGGGA TCGTGCCGGG CATCGGCAAG GTCACCGACA TCAACGTCTT CAACGGCGAC GCCACCCGCT GGGCCGCCTG GCTCACGCTG AACCTGCGCT GA
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Protein sequence | MTRRLLALGL AALLLSCGRP EVIAELPSGQ TVTVAQPSFG DAKPHPWSGR APSSYQVHGI DVSRFQGPID WPTAASAGVS FAFIKATEGG DRVDAAFHEN WRGAGRAGVP RGAYHFFYFC RPAAEQADWF IRTVPKSPRA LPPVLDMEWN PFSPTCTFRP EPAVVRAEAL TFLRQVGAHY GRRPIIYTTI DFFERNEMWR LTGYDFWLRS VAAHPHERYA GHPWTFWQYT GTGIVPGIGK VTDINVFNGD ATRWAAWLTL NLR
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