Gene Rsph17029_3243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3243 
Symbol 
ID4899032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp309731 
End bp310825 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content65% 
IMG OID640113841 
Productbasic membrane lipoprotein 
Protein accessionYP_001045111 
Protein GI126463998 
COG category[R] General function prediction only 
COG ID[COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.25432 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGCA GAACGCTTCT CGCGAGCGCC GCCTCGGGAC TCGCGCTGTC GCTGGCGGGA 
GGCCGGGTCG CGATGGCCCA GGCCAAGGAC AAGGTGAAGG TGGGCTTCGT CTATGTCGGC
CCGATCGGGG ATGGCGGCTG GAGCTTCCAG CACAACGAGG GCCGGCTGGC CGTCGAGAAG
GAATTCGGCG ACCGGGTCGA GACGATCTAT CAGGAAAGCG TGCCCGAGGG CTCCGACGCC
GAGCGCGTGC TGACCCAGAT GGCGCTGTCG GGCTGCGACA TCATCTTCAC CACCTCCTTC
GGCTACATGG ATGCGACGAA CAATGTCGCG GCCAAGTTCC CGAACGTGAA GTTCGAACAT
TGCACCGGCT TCAAGCGCGA GCATCCGAAC GTCGCCACCT ACAACGCCCG CTTCTACGAG
GGCCGCGCGG TCTGCGGCAC CATCGCCGGC CTGATGACCA AGTCGAACAA GATCGGCTAC
ATCGGCTCCT ATCCGATCCC CGAGGTGATC CAGGGCATCA ACTCCTCGTT CATCCATGCG
CGGAAGGTGA ACCCGGAAGT CTCTATCTCC GTGGTCTGGG CCTACACCTG GTTCGATCCG
GCCAAGGAAG CGGATGCGGC CAAGGCGCTC ATCGAGCAGG GCGTGGACGT GATCCTCGCC
CACACCGATT CGACCGCGCC GCTGGCCGAG GCCGCCAAGA CGCCGGGCGT GATCGGCTTC
GGTCAGGCCT CGGACATGGC GAACTACAAG CCCTCGCCGC GGGTCTCCTC GATCATCGAC
AACTGGGCGC CCTACTACGT CAAGCGCGTG GGCATGGTGC TCGACGGCAC CTGGGAGAGC
ACGGACGCCT GGGAAGGCAT CGGCGGCGGC GAAGTGCTGA TCGGCGAGAT CACCGAGGCC
GTGCCGGCCG AGGTGAAGGC CAAGGCGATG GAAGTCCACG ATGCCATCGG GGCGGGCACC
TATCATCCCT TCACCGGCCC GCTCAACAAG CAGGACGGCT CGGCGTGGCT CGCGGAAGGC
GAGACGGCGG CGGACACGGA TCTTCTCGGC ATGAACTTCT ATGTCGAGGG CATCTCGGGC
GAGATCCCAA AGTAA
 
Protein sequence
MDRRTLLASA ASGLALSLAG GRVAMAQAKD KVKVGFVYVG PIGDGGWSFQ HNEGRLAVEK 
EFGDRVETIY QESVPEGSDA ERVLTQMALS GCDIIFTTSF GYMDATNNVA AKFPNVKFEH
CTGFKREHPN VATYNARFYE GRAVCGTIAG LMTKSNKIGY IGSYPIPEVI QGINSSFIHA
RKVNPEVSIS VVWAYTWFDP AKEADAAKAL IEQGVDVILA HTDSTAPLAE AAKTPGVIGF
GQASDMANYK PSPRVSSIID NWAPYYVKRV GMVLDGTWES TDAWEGIGGG EVLIGEITEA
VPAEVKAKAM EVHDAIGAGT YHPFTGPLNK QDGSAWLAEG ETAADTDLLG MNFYVEGISG
EIPK