Gene Rsph17029_3241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3241 
Symbol 
ID4898218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp307670 
End bp308752 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content68% 
IMG OID640113839 
Productinner-membrane translocator 
Protein accessionYP_001045109 
Protein GI126463996 
COG category[R] General function prediction only 
COG ID[COG4603] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.366513 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGGC TCGAGAAGCG CCCGAACCCG TCGCGGTTCT GGAACTACGC GACGCCGGTC 
CTCGCCGTCG TCCTGACGAT GGTCGCGGGC GGGCTCATGT TCGCGCTGCT GGGCAAGAAC
CCGGTCGAGG CGATCCGCAC GATCTTCTGG GATCCGCTGT TCGGAGAGTT CGCCTGGTAT
TTCCGCGGCC AGCTTCTGGT GAAGGCGGGG CCGCTGATCC TGATCGCGGT GGGCCTCAGC
CTCGGCTTCC GGGCGGGGAT CTGGAACATC GGCGCCGAGG GGCAGTACAT GATGGGCGCC
ATCTTCGGCG CCGCGGCGGG GCTTGCGCTC TATCCCGCCG ACAACCGGCT GATCTTCCCG
CTGATGGTGG TGGCGGGCGC GCTCGGCGGC TGGATCTGGG CCATGATCCC CGCGATCCTG
CGCACGAGGT TCCGCACGAA CGAGATCCTC GTTTCGCTCC TTCTCGTCTA TGTGGCGCAG
TCGATCCTCG CCTCGATGGC GCTCGGCGCG CTGCGAAACC CTGAGGGCGG CGGCTTTCCC
GGTTCGCGCA ACCTCTCGCA ATGGGCCTCC TCGGCCAACC CCGAGCTGAT CGCGGGAACG
GGCATGCACT GGGGAGTGGT CGCGGCCTTC GCCTCGGTGA TCGCGGCCTA TATCCTGTTG
CAGCGCCATA TCCTCGGCTT CCAGATCCGG CTTGCGGGTC AGGCCCCGCG GGCCGCGCGC
TTCGCGGGCG TCTCGCCCAA CCGGCTGGTC CTCCTGTGCA TGGGGATCTC GGGGGCGCTC
GCGGGCCTCG CCGGGCTCTT CGAGGTGACG GGCCCGGCCG GGCAGATCTC GATCGATTTC
GCGCAGGGCT ACGGCTTCAC CGCCATCATC GTGGCCTTCC TCGGCCGGCT CAACCCGGTG
GGCATCCTGC TCGCGGGGCT TCTCATGGCG CTGACCTATG TCGGCGGCGA CAATGCCTCG
ACCAACCTCG GCCTGCCTGC GGCCTCGATC CAGGCCTTCC AGGGGATGCT CCTCTTCTTC
CTCCTCGCCG TGGACCTTCT GTCCAACTAC CGCATCCGCC CGAGCCGGAA GGAGACCGCC
TGA
 
Protein sequence
MLRLEKRPNP SRFWNYATPV LAVVLTMVAG GLMFALLGKN PVEAIRTIFW DPLFGEFAWY 
FRGQLLVKAG PLILIAVGLS LGFRAGIWNI GAEGQYMMGA IFGAAAGLAL YPADNRLIFP
LMVVAGALGG WIWAMIPAIL RTRFRTNEIL VSLLLVYVAQ SILASMALGA LRNPEGGGFP
GSRNLSQWAS SANPELIAGT GMHWGVVAAF ASVIAAYILL QRHILGFQIR LAGQAPRAAR
FAGVSPNRLV LLCMGISGAL AGLAGLFEVT GPAGQISIDF AQGYGFTAII VAFLGRLNPV
GILLAGLLMA LTYVGGDNAS TNLGLPAASI QAFQGMLLFF LLAVDLLSNY RIRPSRKETA