Gene Rsph17029_3225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3225 
Symbol 
ID4898580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp282043 
End bp284490 
Gene Length2448 bp 
Protein Length815 aa 
Translation table11 
GC content62% 
IMG OID640113824 
ProductEcoEI R domain-containing protein 
Protein accessionYP_001045094 
Protein GI126463981 
COG category[V] Defense mechanisms 
COG ID[COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.376811 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGCG TTGGCCTTTC CGAACGAGAC ATCTGCTCCC AGCGGATCAC GCCCGCCATT 
ATTCAGGCCG GCTGGGACCT CTCAACCCAG ATCAGGGAGG AGGTCAGTTT CACGAAGGGC
CGCATCATCG TCCGCGGCAG GCTGGTCAGC AGGGGCAAGG GAAAGCGTGC CGACTACATT
CTGTCCGTGC GCCCGAACAT CCGCCTCGCG GTCGTCGAGG CGAAGGACAA CGGTCATGCT
GTTGGCGCGG GGATACAGCA AGCGCTTGAG TACGCCGAGA CGCTGAACCT ACCCTTCGCG
TTCTCCTCGA ACGGTGAGGG CTTCGTCTTC CACGACCGGA CCGGCCTGAG CCCAACGCCG
GAGCGGCTTC TGACACTCGA TGAATTTCCG TCGCCTGCCG AACTCTGGCA ACGGTACTGC
GAATGGAAGG GTCTGGATGC CGGGGCGAGC CACGTCACCC TGCAGGACTA TCATGACGAC
GGCAGCGGCA AGGAACCGCG GTACTACCAG ATCAACGCCG TGAACGCCGC AATCGAAGCA
ATCGCGCGCG GCGATCGCCG CGTGCTGCTC GTCATGGCCA CCGGCACCGG CAAAACCTAC
ACCGCATTCC AGATCATCTG GCGCTACCGG CAAGCCTTCC CCGGCAAGCG CGTCTTGTTC
CTCGCCGATC GCAATGTCCT GATCGACCAG ACGATGGTCA ACGATTTCCG GCCATTCTCG
GGCAAGATGG CCAAGCTCTC TACTCAGGCC AAGACCATCG AGCGCGCCGA CGGGAGCACC
GTCGACCTTC CGCTCGGGCT CGACCGCAAG CGGCGGATCG ACCCGTCCTA CGAGATCTAC
CTGGGCCTCT ATCAGGCGAT CACCGGCCCT GCGGAAGAGG ACAAGATCTT CCGTGAGTTC
TCCAGGGATT TCTTCGACCT CATCATCATC GACGAATGCC ACCGCGGCAG CGCGGCCGAG
GACTCGGCCT GGCGGGAGAT CCTCGACCAT TTCTCGGGCG CGGTGCAGAT CGGTATGACG
GCCACTCCGA AGGAGACCGA ATACGCCTCG AACATCGCCT ATTTTGGCGC ACCGGTATAC
AGCTACACGC TGAGGCAGGG CATTCGCGAC GGCTTCCTGG CGCCGTACAA GGTGATCAAG
GTCCACATCG ACCGTGACGT TCAGGGCTAC CGCCCCGAGG CTGGGCAACT CGACCGGGAC
GGGCAGGAGG TCGACGACCG GATCTACAAC ATCAAGGACT TCGACCGCAC ACTGGTGCTC
GACGACCGGA CCGTCCTCGT GGCGAGAAAG GTCACCGAGT TCCTGAAGGA AAGCGGCGAT
CGGATGGCGA AGACCATCGT CTTCTGCGTC GATCAGGAAC ACGCGGCCCG GATGCGCCAA
GCCCTGATCA ACGAGAACGC CGACCTGGTA GCGCAGAACT CCCGCTACGT CATGCGCATC
ACCGGCAACG ACAAGGAAGG ACTCGACCAG CTCGGGAACT TCATCGATCC GGAAGTGGCC
TATCCTGTCA TCGTCACCAC CTCGCGGCTG CTCTCAACCG GTGTGGATGC CCAGACCTGT
CGCCTTATCG TGCTCGATCG CGAGGTCGGC TCGATGACCG AGTTCAAGCA AATCGTCGGT
CGCGGCACAC GGGTCCACGA GGACACCGGC AAGTTCTACT TCACGCTGAT GGATTTCCGG
GGCGCATCGA ACCATTTCGC GGACCCCGCC TTTGATGGCG AACCGGTTCA GATCTACGCT
CCGACTGATA CCGACCCGAT CACGCCACCG GAGGACGTGC CGCCAGCGGG CGACGAGGAC
GATCCGATCC CGCCCGTTCC CGGGGCGGAC GAGACTGTCG TCCAGGATCC CGATTGGACG
GACGCCGGTC CCCGGGAGCC CCTCCGCAAG ATCTACGTCG ACGGGGTTGG CGCCCTGATC
ATCGCCGAAC GCGTCGAATA CCTCGATGAA CACGGCAAGC TGATCACCGA GTCTTTGCGC
GACTACACCC GCAAGGCACT GAAACGGCGC TTCGCCAGCC TCGACGACTT CCTGAAGCGC
TGGAAGACAC AGGAGAAGAA GCAGGCCGTT GTCGAGGAAC TCGAAGCCGA GGGCCTGCCG
CTCGACGTGA TCGCGCAGGA ACTGGGGCGG GATCTCGATC CCTTCGACCT GATCTGCCAC
ATCGCCTTTG ACGCCAAGCC ATTGACTCGG CGCGAGCGTG CCGACGGCGT GAGGAAGCGC
GATGTCTGGG GCCGGTATGG CGACACCGCC CGTGCCGTCC TCAACGCCCT GCTCGACAAG
TACGCCGATG ACGGCCTTCT CGACTTCGAC GACCCCAAGA TCCTGAAAAT CAACCCGTTC
TCCCAGATGG GAACCGAGGT TGAACTCATC AGGGCTTTCG GCAAGAAGCA GGACTATCTG
AAGGCCATGC ATGACTTGCA GGTCGCCCTC TACGAAGAAA GTGCCTGA
 
Protein sequence
MDSVGLSERD ICSQRITPAI IQAGWDLSTQ IREEVSFTKG RIIVRGRLVS RGKGKRADYI 
LSVRPNIRLA VVEAKDNGHA VGAGIQQALE YAETLNLPFA FSSNGEGFVF HDRTGLSPTP
ERLLTLDEFP SPAELWQRYC EWKGLDAGAS HVTLQDYHDD GSGKEPRYYQ INAVNAAIEA
IARGDRRVLL VMATGTGKTY TAFQIIWRYR QAFPGKRVLF LADRNVLIDQ TMVNDFRPFS
GKMAKLSTQA KTIERADGST VDLPLGLDRK RRIDPSYEIY LGLYQAITGP AEEDKIFREF
SRDFFDLIII DECHRGSAAE DSAWREILDH FSGAVQIGMT ATPKETEYAS NIAYFGAPVY
SYTLRQGIRD GFLAPYKVIK VHIDRDVQGY RPEAGQLDRD GQEVDDRIYN IKDFDRTLVL
DDRTVLVARK VTEFLKESGD RMAKTIVFCV DQEHAARMRQ ALINENADLV AQNSRYVMRI
TGNDKEGLDQ LGNFIDPEVA YPVIVTTSRL LSTGVDAQTC RLIVLDREVG SMTEFKQIVG
RGTRVHEDTG KFYFTLMDFR GASNHFADPA FDGEPVQIYA PTDTDPITPP EDVPPAGDED
DPIPPVPGAD ETVVQDPDWT DAGPREPLRK IYVDGVGALI IAERVEYLDE HGKLITESLR
DYTRKALKRR FASLDDFLKR WKTQEKKQAV VEELEAEGLP LDVIAQELGR DLDPFDLICH
IAFDAKPLTR RERADGVRKR DVWGRYGDTA RAVLNALLDK YADDGLLDFD DPKILKINPF
SQMGTEVELI RAFGKKQDYL KAMHDLQVAL YEESA