Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3223 |
Symbol | |
ID | 4898578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | - |
Start bp | 276807 |
End bp | 278189 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640113822 |
Product | transposase, IS4 family protein |
Protein accession | YP_001045092 |
Protein GI | 126463979 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3666] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.379638 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGGAA CGCGGTCGGC GGCGCAGGGC TCGCTCTTTT ACGAGTTCTC GCTTGAGAAC CATGTCCCGG CCGACCACCT GCTGCGGTCC ATCGACCGTT TCGTGGACCT GAGCGACATC CGGCGGCGCC TCGCGCCTTT CTACAGTTCC ACCGGCCGAC CCTCAATCGA TCCCGAACTG ATGATCCGCA TGCTGCTGGT CGGCTATTGC CTCGGCATCC GGTCCGAGCG GCGCCTGTGC GAGGAGGTCC ATCTGAACCT TGCGTACCGC TGGTTCTGCC GGCTCGACCT GAGCGGCCCG GTGCCCGATC ACTCGACCTT CTCGAAGAAC CGGCACGGCC GGTTCCGGGA CAGCGATCTG TTCCGGCAGC TCTTCGAAGC GGTGGTGGCG CGATGCATTT CCGAGGGTCT GGTCGGCGGC GAGACCTTTG CCGCCGATGC CAGTCTGATC CGGGCGGATG CAAACAGGCA GTATTCGGCG CCTCAACCGC TCTGGGAGCA GGCCCGGATC GAGGCCGCCT CCGCACCGCG CGCGGTGCGG GAGTATCTGG AGGTGCTTGA CGACGCTGCC TTCGGCGCGG CCAGCGACAC GCAGCCCAAG TTCATGTCCT ATGCCGATCC GGCCGCACAA TGGACCGGTG CCAAGAAGGG ACCAGCGCAT TTCGCCTATG CGGACAACTA CCTGATCGAT ACGGATCATG CCGTGATCGT GGATGTCGAG GCGACCCGGG CGATCCGCCA GGCCGAGGTC GGATCGGTCC GCACCATGAT CGAGCGTACG AAGGAGCGGT TCGATCTGTC CCCCAAACGT CTGGCAGCCG ACACCGCCTA CGGCTCCGGC GAGATGCTGG GCTGGCTGGT CGACGAGGCC GGGGTGGAGC CACACATTCC CGTCATCGAC CGGTCCCTGC GCAGCGACGG GACCTTTTCG GCATCGGACT TCGCTTTCGA CACGGAGGCA GACCAGTACA CCTGCCCTGC AGGCAACCTG CTGAAGAAGT ACTGGCGCGA CATGACGGTG CCGCGAACCG GGATCACCCG CGACGGGTTC CGGCGCTACT TCGCCAGCAA GTCGGACTGC TCCACCTGCC CGCTGAAGGA CAAGTGCTGC CCGGGTCAGC CGGCGCGGAC GATCACCCGA CATATCCACG AGGCGGCAAG GGACATCGCC CGCCGGTTGG CCGGAACCGA GGAGTACGCC GAGGCCAGCC GACGGCGAAA GAAGGTCGAA ATGCTCTTCG CCCATCTCAA GCGCATCCTG CGCCTCGACC GCTTGCGCCT GAGAGGCCCG AATGGCGCCA GGGACGAGTT CCACCTCGCC GCCACCGCCC AGAACCTGAG GAAGATGGCG AAACTGATCC CAATGCCGCC GGTAACCGCA TAG
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Protein sequence | MMGTRSAAQG SLFYEFSLEN HVPADHLLRS IDRFVDLSDI RRRLAPFYSS TGRPSIDPEL MIRMLLVGYC LGIRSERRLC EEVHLNLAYR WFCRLDLSGP VPDHSTFSKN RHGRFRDSDL FRQLFEAVVA RCISEGLVGG ETFAADASLI RADANRQYSA PQPLWEQARI EAASAPRAVR EYLEVLDDAA FGAASDTQPK FMSYADPAAQ WTGAKKGPAH FAYADNYLID TDHAVIVDVE ATRAIRQAEV GSVRTMIERT KERFDLSPKR LAADTAYGSG EMLGWLVDEA GVEPHIPVID RSLRSDGTFS ASDFAFDTEA DQYTCPAGNL LKKYWRDMTV PRTGITRDGF RRYFASKSDC STCPLKDKCC PGQPARTITR HIHEAARDIA RRLAGTEEYA EASRRRKKVE MLFAHLKRIL RLDRLRLRGP NGARDEFHLA ATAQNLRKMA KLIPMPPVTA
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