Gene Rsph17029_3188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3188 
Symbol 
ID4898551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp224763 
End bp225797 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content49% 
IMG OID640113789 
Productputative ATP-binding protein 
Protein accessionYP_001045059 
Protein GI126463946 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.636765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCC TTACAGGTAT ACTCGCTGAG AATTTCGCGG CGTTCAAAAA AATAGATCTT 
AAATTTAAGC CCGGAATCAA CATTTATATC GGCGGCAATG GAACCGGCAA AACACATCTC
TTGAAAACCC TTTATGCGGC CTGTTCTATA GCCGATGCTG AAGATATCGA TCGCGGATTC
GGAGATAAAC TAGTAGGGGT GTTTCATCCA TACGAGGGGC GGCCAGGAAG GATCTCCTAC
CGCGGCTCGG GGAGCGTTAC GAGCAAAGTA ACCATCCAGA GGGGGCGGCA GAAGTTAATA
GCGAGATTTT CCAATCATAC ACTTTCACCC GACAAAATAG AGGTTGAGGG TCAAGCGGCT
TGGAAAAAAA ATGGAGGAGC GTGCGCATAC ATCCCAGTTA AGGAGATGTT GGCCCATGCT
CCTGGATTCT TAGCTACGAT GAAGCGGCGC GAGATAGCCT TTGAGGAGGT GTACGTTGAT
ATAATCACTC GCGCCTTCCT CCCGCCACTT AAGGGGCCCG CTTCAGCAAA AAGAAGAAAG
ATACTTGGCG CACTCCAACA TGCGATTGAG GGTAAGGTCA AAACCAAAGG TGAGGTCTTC
TTCCTGAAGA ATGGCCAAGG CGATCTTGAG TTTACCCTCC TGTCTGAAGG AATGCGGAAG
CTAGCTTTGA TCTGGATATT GACTCAGAAC GGCGTGTTGA CCGACGGCTC AACATTGTTT
TGGGACGAGC CTGAAGCAAA CTTAAACCCC TCTCGCTTGG GGGAGGTGGT TGAAGTTATG
TTGGAGCTGC AGAGACTTGG GGTTCAGATA TTTGTCACCA CACACAACTA CGTGCTACTC
AAAGAGTTCG AGATGAGATG CGGGAGCAGC GACTCTCTGT CCTACACAGC GCTATTCAGA
AATGCGGCTG GCGAAATCAA TAGCGAGACT AAAGACAGCC ATCTCGAATT AAGCCACAAT
AGCATCGCAG ATACCTACGA TTCGATCTAC AATCGAGAGG TCGAGAAATC GATAAGAGGG
CTGGATTTTG GTTGA
 
Protein sequence
MSVLTGILAE NFAAFKKIDL KFKPGINIYI GGNGTGKTHL LKTLYAACSI ADAEDIDRGF 
GDKLVGVFHP YEGRPGRISY RGSGSVTSKV TIQRGRQKLI ARFSNHTLSP DKIEVEGQAA
WKKNGGACAY IPVKEMLAHA PGFLATMKRR EIAFEEVYVD IITRAFLPPL KGPASAKRRK
ILGALQHAIE GKVKTKGEVF FLKNGQGDLE FTLLSEGMRK LALIWILTQN GVLTDGSTLF
WDEPEANLNP SRLGEVVEVM LELQRLGVQI FVTTHNYVLL KEFEMRCGSS DSLSYTALFR
NAAGEINSET KDSHLELSHN SIADTYDSIY NREVEKSIRG LDFG