Gene Rsph17029_3179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3179 
Symbol 
ID4898764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp208961 
End bp210160 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content72% 
IMG OID640113781 
Productbeta-ketoadipyl CoA thiolase 
Protein accessionYP_001045051 
Protein GI126463938 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.694628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGG TCTTCATCTG CGACTATATC CGCACGCCCA TCGGCCGCTA CGGCGGGGCG 
CTTTCCCCGG TCCGGGCCGA CGATCTGGGC GCCGTGCCCC TCAAGGCCCT GATGGCCCGC
AACGGCGGGG TGGACTGGGA GGCCGTGGAC GATGTGATCT TCGGCTGCGC CAATCAGGCG
GGCGAAGACA ACCGCAACGT GGCCCGCATG TCGGCGCTGC TGGCGGGGCT GCCGGTGGGT
GTCACGGGCA CGACGATCAA CCGGCTGTGC GGCTCGGGCA TGGATGCCGT GCTGACCGCC
GCCCGCCAGA TCGCCGCGGG TGAGGCGGAT CTCGTGATCG CGGGCGGGGT GGAGAGCATG
TCGCGCGCGC CGTTCGTGCT GCCGAAGGCG GGAACGGCCT TCACGCGCTC GGCCGAGATC
CATGACACGA CGATCGGCTG GCGCTTCGTC AATCCGGCGA TGGAGGCGGC CTACGGCGTG
GATCCCATGC CGCAGACGGG TCAGAACGTC GCCTGCGACT TCGGCATCAG CCGCGAAGCG
CAGGATGCCA TGGCCCTTGC CTCGCAGACG AAGGCGGCGG CGGCGCAGGC GAACGGGCGG
CTCGCACAGG AGATCACGCC GGTCCTCGTT CCGCAGCGCC GGGGCGAGCC GGTCCGGGTG
GAACAGGACG AGCATCCGCG GGCGACGACG CCGGAGGCGC TTGCCAAGCT GAAGCCGCTC
TTCGCCGGCG GATCCGTCAC GGCGGGCAAT TCCAGCGGCG TCAACGACGG CGCGGCCGCC
CTGATCCTCG CCAGCGAGGC GGCGGTCCGG CGCCACGGGC TTACCCCCAT CGCGCGGGTG
CTGGGCGGCG CCACCGCGGG CGTGCCGCCG CGCATCATGG GCATAGGCCC GGTGCCCGCG
GCCCTGAAGC TGATGGCCCG GCTCGGACTG ACCACGGAGG CTTTCGACGT GATCGAGCTG
AACGAGGCCT TCGCCGCGCA GGGGGTGGCC ACGCTCCGGC AGCTCGGCAT CGCCGAGGAA
GATGCGCGGG TGAACCCCAA CGGCGGCGCC ATCGCCCTCG GCCACCCGCT GGGCATGTCG
GGCGCCCGCA TCACCGGCAC GGCGGCGCTC CAGCTGCAGC GCACGGGCGG GCGTCGGGCA
CTCTCGGCCA TGTGCATCGG TGTGGGTCAG GGCATCGCCA TCGCGCTGGA ACGGGTCTGA
 
Protein sequence
MTQVFICDYI RTPIGRYGGA LSPVRADDLG AVPLKALMAR NGGVDWEAVD DVIFGCANQA 
GEDNRNVARM SALLAGLPVG VTGTTINRLC GSGMDAVLTA ARQIAAGEAD LVIAGGVESM
SRAPFVLPKA GTAFTRSAEI HDTTIGWRFV NPAMEAAYGV DPMPQTGQNV ACDFGISREA
QDAMALASQT KAAAAQANGR LAQEITPVLV PQRRGEPVRV EQDEHPRATT PEALAKLKPL
FAGGSVTAGN SSGVNDGAAA LILASEAAVR RHGLTPIARV LGGATAGVPP RIMGIGPVPA
ALKLMARLGL TTEAFDVIEL NEAFAAQGVA TLRQLGIAEE DARVNPNGGA IALGHPLGMS
GARITGTAAL QLQRTGGRRA LSAMCIGVGQ GIAIALERV