Gene Rsph17029_3173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3173 
Symbol 
ID4898958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp199566 
End bp200429 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content67% 
IMG OID640113775 
Productamidohydrolase 2 
Protein accessionYP_001045045 
Protein GI126463932 
COG category[R] General function prediction only 
COG ID[COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.820351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.79914 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCG ATTTTTCCTC GCGCCCGCCG CACCCGGATT TCTCGCCCCC CGCCCCGCAT 
CTCGAGAATT ACCGCCGGGT CTATCAGGCG AGCGAACGCC GCTCGGCCGC CTCGGACGCG
GCGCAGGGAC TGGACAGCTG GCTCGAGACC TACGACCGGC TGGGGGCACG CCATGTGGTG
CTGAAGGCGC GCGACCTGAC CACGACCTTC GGCTTCAGGA TCTCCAACGA GGCGGTGGCG
GAGTTCATCC GGGCGCACGG CCCGCGCTAT GTGGGTTTTG CCGGCGTCGA TCCCTGGCAG
GAAGATGCGG TGGACCGTTT CGACCATGCG ATCCGCCACC TCGGGCTGCG CGGTCTCAAT
CTGCAATGTT TCGAGCTGAA GATGCGCCCC GACGACGAGC GGCTGTTTCC GCTCTACGAG
AAGGCCATCG AGCTCGATGT GCCGGTGAAC ATCCATTGCG GCATCAACTT CTCGACCCAC
ACGCCCATGG CGCTGGGGCG GCCGGAATAT CTCGACAATG TCATGGTGCG CTACCCCGAG
CTGCGCGCCG TGGCCTCTCC CCCCGGCTGG CCCTGGGTGC AGGAACTGAT CGGGGTCGCC
TGGCGCCATC CCAACCTCTC CATCGGGATC CTGGCCGTCC GGCCGAAACT TCTCGCCAAG
GCGCAGTCTG GCTACGAGCC GCTGCTGCAG TACGGCCGCA CGATCCTGAA GGAGAAGATC
ATCTTCGGCT CCGCCTTTCC GATGATGCCG GTCGAGACGG CGCTCGCGGA ACTGGACGGG
CTGGGGCTCG ACGCGGACAC CCGCCGGCTC TGGCTGCACG ACAATGCGGC GCGGCTGCTG
GGCCTGAACA CCGGCGCAAC TTGA
 
Protein sequence
MLIDFSSRPP HPDFSPPAPH LENYRRVYQA SERRSAASDA AQGLDSWLET YDRLGARHVV 
LKARDLTTTF GFRISNEAVA EFIRAHGPRY VGFAGVDPWQ EDAVDRFDHA IRHLGLRGLN
LQCFELKMRP DDERLFPLYE KAIELDVPVN IHCGINFSTH TPMALGRPEY LDNVMVRYPE
LRAVASPPGW PWVQELIGVA WRHPNLSIGI LAVRPKLLAK AQSGYEPLLQ YGRTILKEKI
IFGSAFPMMP VETALAELDG LGLDADTRRL WLHDNAARLL GLNTGAT