| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3158 |
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| Symbol | |
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| ID | 4898720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | + |
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| Start bp | 182060 |
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| End bp | 183037 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640113760 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001045030 |
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| Protein GI | 126463917 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2203] FOG: GAF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0640866 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGACT GCGAGAAACT TCTCGACGAG CCCGGACGGC TGGCCGCCGT CCGGCGCTAT
GCCGTGCTCG ATACGGCGCC GGAAGAGCCG TTCGACAAGC TCACCCGGCT GGTCTGCAAC
GTGCTCGAGG TGCCGTATGC GGCGGTGACC CTCATCGACG CGGACCGCCA GTGGTTCAAG
TCTCTCGTCG GTCTGAGCGG GTCCGAGGGT CCGCGCCACG AGTCCTTCTG CACCCACACG
ATCAAGACGC GCGACCCGAT GGTCGTCCCC GACGCCACGC TCGATCCGAG GTTCCGGGAC
AGTCCGCTGG TCACGGGGGC GGCCGGCATC CGCAGCTACC TCGGCGTTCC GCTCGAAACC
CCGGACGGCT ACAATCTCGG GGCGCTCTGC GCCGTCGATA CCGCCCCCCG GACCTTCAGC
ACCTCCCAGA TCGAGATCAT GAAGAGCTTC GCCTCGCTGG TTCTCGACGA ACTGGAACTC
CGGCAGATCG CGCTCAGCGA CGCGCTGACC GGCGCCATGA CGCGCCGCGG CTGGCTTGCC
GCGGTCGAGA AGGAGATGGC CCGCGGCGCG CGTCAGGGGA CGCAGGCGGC CATCGTCCTC
TTCGACGTGG ATCACTTCAA GACGATCAAC GACACTCACG GACATGCGGT GGGCGATGCC
GTCCTGCAGG CCCTGACGCG GCGCTGCCTG CTGCATCTGG GCCCGGCCGA TGCGCTGGGA
CGGATCGGGG GAGAGGAGTT CGCCGTGCTG GTGCCGGACG CAGGCCTGCC CGAGGCGATG
GAACTGGCAG AGCGCCTGCG CCGCAGCTTC TCCGACGCGC CGATCGAGGT GGCGGGCCAT
GCGCTCCGGG TCACCGCCAG CTTCGGGGTG CAGGGCCTCG ATGGCGACAC GGGCACCGCC
GGAAGCTGGC TGGCTGCCGC GGACCGGCGG CTCTACGAGG CGAAGGCGGC CGGCCGCAAC
CGCTGCCACG GCGGCTGA
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| Protein sequence | MQDCEKLLDE PGRLAAVRRY AVLDTAPEEP FDKLTRLVCN VLEVPYAAVT LIDADRQWFK
SLVGLSGSEG PRHESFCTHT IKTRDPMVVP DATLDPRFRD SPLVTGAAGI RSYLGVPLET
PDGYNLGALC AVDTAPRTFS TSQIEIMKSF ASLVLDELEL RQIALSDALT GAMTRRGWLA
AVEKEMARGA RQGTQAAIVL FDVDHFKTIN DTHGHAVGDA VLQALTRRCL LHLGPADALG
RIGGEEFAVL VPDAGLPEAM ELAERLRRSF SDAPIEVAGH ALRVTASFGV QGLDGDTGTA
GSWLAAADRR LYEAKAAGRN RCHGG
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