| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3142 |
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| Symbol | |
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| ID | 4899057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | + |
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| Start bp | 162028 |
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| End bp | 164943 |
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| Gene Length | 2916 bp |
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| Protein Length | 971 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640113744 |
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| Product | peptidase C14, caspase catalytic subunit p20 |
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| Protein accession | YP_001045014 |
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| Protein GI | 126463901 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily
[COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0120555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.089148 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGGGG CAGAGCAGCG ATGGCCGGCG CGGGCGGCTC TCCTGCTCGT GCTGATCGCT
GCGGCCGGGC TGGCGCGGGG GCAGGAGACA CCCTCCGGCC CGCCGCCGCG GGTGGCGATG
GTGGTCGGCA ATTCCGCCTA TCAGAACGTG CCGGCTCTGC CCAATCCCGC GGGCGACGCG
GAACTCGTGG CGGAGAAGCT GTGGGAATCG GGCTTCGAGG TCATCGAGAC GGTGGACGCC
GACCGCGAGA CCATGCTCGC CGATCTCGCG ACCTTCCGCA GCCGCCTGCG CGAGGGCAGC
GAGGCGCTCT TCTTCTACGC GGGCCACGGG GTGCAGATCG GCGGGCGGAA CTACCTGCTG
CCGGTCTCGG TCGCCCCTTC CTCGGTCGAA GACCTGAAGG CCCAGGCCAT CGATGCGCAG
CTCTTTCTTG ATGTGATGGC GCAGTCCGGC GCGCGGCTGA CGCTCGTGCT GCTCGACGCC
TGCCGCAACA ATCCGTTTCT CGACATGCCC TCCGACGGCG CCGAGGCCAT CGCCACCCGC
GCCCTCTCGA TCGGCGCCTC GCGCGCAGCG GTGGAGCGGG GGCTCCGCGA TCTGGCGGCG
GCCAGCCGGG GCGGTCTGGC CGAGATGTCG GCCGGCCGCG GCGAGGCGCT CATCAGCTTT
GCCACCGCGC CCGGACAGGT GGCCTTCGAC GGGCGCGGAC GGCACAGCCC CTATACGAGC
GCGCTCGCCG GCAGCATCGA CGAGCCGGGG CTCGAGCTCG TCGATCTCTT CCGCAGGGTG
CGGGGCGCGG TGCGCGAGGC GACCGGCGGG CAGCAGATCG CCTGGACGGC GAGCACGCTC
GAGAGCCGCT TCTATTTCAA GCCGCCGGCC GAAGATCTGC GCTCTGCCAC CACCGGGATG
GGCACCGGGT CGGACACGCT CGGCGCGTTG CCGCCACGGC GGGTGGTGGA CCGCACCTTC
TGGCGCGCGA TCCGCGACAC GGACCGGCTC GACGCCTTCA CCGCCTATGT CCGCACCATG
CCGGACGGCG CCTTCGTCGC CGAGGCGAAG GAGAAGATCC GCAGCCTCGG CGGCGATCCC
GAGGCGATCC CGGTCTCGGA CCTGTCGCTG CCGGAGCGGC CTCGCGGCTT CGTGCTGGCC
GATCCTGCGG CGCAGGCCGA TCTCGCGGCG ACGCTCGACC GGGCGCCCGC GTCGGTGCCC
ATCGGAACGG GGGCGGCCCG CATCGGCGCC GCACCCGGCA GGGCGGGCTG GGTTCATGTG
GCCGCGGCCC CGCGTCTCGG CGCGGTCTCG GCCGGCGGCA CCCGCCTCGA GGCGGGATCG
GTGCGCTGGA TGGAGGCGGA CCAACCGCTC GACTACCTCC CCGGCATCGG CTCGAACGGC
GGGCTCGACA GTCTCCGGGC CGAGGCCCTG CGCGAGGGCG GCACGACCGA ACCCCTTGAG
GCTGCGGTCG AAACCTATGT CGACGCCTGC GACATCCTTG CGGGCAACCC CTACGACAGC
CAGCGCGTCA CCGCCGGCAC GCGCCAGTTC ATCCTCGACC GCAACCATGA TGCCGCCATC
GCGGTCTGCG AGATCGCCGT CGCGCGCCAT CCGGAGGTGG TGCGGTTCTG GGCCGAACTC
GCGCGCGGCT ACCGCGCGGC GGGCCGCTAC GAGGAGGCGC TCCACTGGCA GCAGAAGGCG
GTCGATGCGG GCTATGCCTC GGCGATGGTC TATCTCGGGC AGATGTTCCT CGACGGCCAG
GCCGTGCCGC AGGACTTCGA CCGTGCGCGG GAGCTGTTCG AGGCGGCCGA TGCCCGCGGC
GAGACGGCGG CGCTGACGGC GCTGGCCTGG ATCCACCGGG CGGGGGTGGG TGTGCCGGAG
GATCCGGCCC GGGCGCTCGA CTTCTACCGG CAGGGGGCGG CGCGCGGCAA CGACTGGGCG
ATGACCAACA TCGGCGAGTT CTACCAGAAG GGCCTGAGCG TCGCCCGGGA TCCGGCCGAA
GCGGTGCGCT GGTATACGGC CGCGGCCAAG AGCGGCGAGC TGACCGCCCA AACGCGGCTC
GCGCGGATGT ATCAGACCGG CGACGGCATT GCGGTGGATG AGGCGCAGGC CCGCTTCTGG
TTCGAGACTG CCGCGGGCCG GGGCGTGCCG AATGCGCTGA CCCGTCTCGG CCTCATGTAT
GAGCAGGGTC AGGGGGCGGA CCGGGATCTC GAGGCAGCGG CGCGTCTTTA CGGCCGGGCG
GCTGCCGAGG GCGACGCCGA GGCCTGGCTG CGGCTCGGCC GGCTCGAAGC CTCGGACGCG
CCGCTGTTCG ACCGGCCCGA GCGCGCCCTG CCGCTGCTGG AGAAGGCGCT CGCGGCGCAG
GTGCCGGGCG CCGCGCGCGA GCTCGGGCGG CTCTATGAGA CGGGGCGCGG CGTGACGAAG
GATCTGGCCC GCGCCCGGAC GCTCTATGTG CAGGAGGCGG GCGCGAACCC CTGGGCCGCG
CGCGACGCCG GGCGCGCCTT CGCCTCGGAT GAGGGCGCGC CCGCCGATCC GGCGCAGGCG
GCCCGCTGGT ATCGGGCCGC GGCCGAGGGC GGGGTTCCGT GGGCGGCTCT CGATCTCGGG
CGGCTCTACG AGACCGGCCG CGGTGTGCCG CAGGACCGGA CCGAGGCGCT GGTCCTCTAT
GCCGCGGCCG CGCGTCCCGG AGGCGATGCC AGGGCGGCCG AGGCCGCCCG CCGCGCCGCC
GCCGGCTATT CGGCCGAGGA GACGATCCGG GCGGCGCAGC TGCTGCTCGG CCGCCTCGGC
GCCGAGGTGG GCACGCCCGA CGGCCGGGTC GGCCCCGCGA CGCGGGACGC CCTCGCCCGC
GTCTTTGCCG CGCAGGGGCG GGCCGCGCCC GGCACCCGCA TCGACTTCGA CCTGCTGGCC
GAGCTTTCGG CGATGGATGA GGAGAGACTG CCATGA
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| Protein sequence | MPGAEQRWPA RAALLLVLIA AAGLARGQET PSGPPPRVAM VVGNSAYQNV PALPNPAGDA
ELVAEKLWES GFEVIETVDA DRETMLADLA TFRSRLREGS EALFFYAGHG VQIGGRNYLL
PVSVAPSSVE DLKAQAIDAQ LFLDVMAQSG ARLTLVLLDA CRNNPFLDMP SDGAEAIATR
ALSIGASRAA VERGLRDLAA ASRGGLAEMS AGRGEALISF ATAPGQVAFD GRGRHSPYTS
ALAGSIDEPG LELVDLFRRV RGAVREATGG QQIAWTASTL ESRFYFKPPA EDLRSATTGM
GTGSDTLGAL PPRRVVDRTF WRAIRDTDRL DAFTAYVRTM PDGAFVAEAK EKIRSLGGDP
EAIPVSDLSL PERPRGFVLA DPAAQADLAA TLDRAPASVP IGTGAARIGA APGRAGWVHV
AAAPRLGAVS AGGTRLEAGS VRWMEADQPL DYLPGIGSNG GLDSLRAEAL REGGTTEPLE
AAVETYVDAC DILAGNPYDS QRVTAGTRQF ILDRNHDAAI AVCEIAVARH PEVVRFWAEL
ARGYRAAGRY EEALHWQQKA VDAGYASAMV YLGQMFLDGQ AVPQDFDRAR ELFEAADARG
ETAALTALAW IHRAGVGVPE DPARALDFYR QGAARGNDWA MTNIGEFYQK GLSVARDPAE
AVRWYTAAAK SGELTAQTRL ARMYQTGDGI AVDEAQARFW FETAAGRGVP NALTRLGLMY
EQGQGADRDL EAAARLYGRA AAEGDAEAWL RLGRLEASDA PLFDRPERAL PLLEKALAAQ
VPGAARELGR LYETGRGVTK DLARARTLYV QEAGANPWAA RDAGRAFASD EGAPADPAQA
ARWYRAAAEG GVPWAALDLG RLYETGRGVP QDRTEALVLY AAAARPGGDA RAAEAARRAA
AGYSAEETIR AAQLLLGRLG AEVGTPDGRV GPATRDALAR VFAAQGRAAP GTRIDFDLLA
ELSAMDEERL P
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