| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3130 |
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| Symbol | |
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| ID | 4899188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | + |
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| Start bp | 146451 |
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| End bp | 147812 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640113732 |
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| Product | OmpA/MotB domain-containing protein |
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| Protein accession | YP_001045002 |
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| Protein GI | 126463889 |
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| COG category | [N] Cell motility
[S] Function unknown |
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| COG ID | [COG1360] Flagellar motor protein
[COG3455] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family
[TIGR03350] type VI secretion system OmpA/MotB family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00118735 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.252633 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGGG AGGACGATCC GTTCGGTCTG GCGACCGATG CCGCCCGCAC CCGGATCAGG
CCCTCTCCTG CCGAACGGGC GCGCCGGGCC GCGGCCGGGC CCGCTCCGGC CGAGGTGGGC
GCCGTGGCCC CGGTCCGCCC GGCCCACGGG AGGACCCATC CCAATCCGCT CGTCGCGAGC
TTCGCCGTCC TGCTCGAACT CGCGCCTGCG CTGGAAGGCG CCGCCCCGCC GCAGGAGCCG
GGGATGCTGC GCGCGCGGCT CCGCGACGGT CTGACCGAGG CCCGCGACCG GAGCGTGGCG
CAGGGCGTGC CGCTGGCCCG CGCCGACCGC GCCGCGTGGT TCGTGGCAGC GCTCCTCGAC
GATCTGGCCT TGAACACGCC CTGGGGTGCG GCCAGCGGAT GGCCGCGCCA GCCGCTCGTG
ACCGAGCTGT CGGGCGAGGT CGATGCGGGC ACCCGCTTCT TCGACCGCCT CGAAGAGCTC
GCGCGCCATC CGACGCTCGA CCCGCAGCTT CTGGAGCTGG TCTGGCTCTG CCTGTCGCTC
GGCTTTCGCG GCAAGCACCG CACGGGGCGC GAGGGCGGCG AGAGCGCGCT CTTCGCGCTC
CGCACCGGCG TGGCGCGCCT TCTGCGCAAT CCGGAGGCTA CGGCCGCGCC GCTCTCGCCG
CACTGGGAGG GGGTCGCGGC GCCCGACGCG CCGCGCCGCT TCGCGGTGCC GGTCTGGACG
GTGGGACTCG CGGCGCTTGC GCTGATGGCC GCCCTCTACA CGGGCCTCTC GCTCCAGCTG
TCGGCGCGGG CCGAGAAGCT CTTCGATCTG GCAGCCCTCG TGCCCCCGGC CGAGCGCGCG
GCCCTGTTCC GCCCCCCGCG CGAGACGGTC GCGCCGCCGC CCGAGATCCG GGTGGAGCCG
GTGGTGATCG AGCTTCTGCC CGCCTTCCGG GCCCGCGCCC CCGCCGCCAC CGCGGCCGCC
CTTCAGGGCC GCGAGGATGC GCAGCTCACC ATCCTCACGC TGCAGGGCAC GGACCCCGAG
CTGTTCCGCT CGGCCCGCGC CGAGGTGAAC CCGGACTATG CGCCGCTGGT GGCCTCGGTC
GCGGCCGTCC TCGCCGAGAA CCGCGAGCTG GTGGGGGCAG TCCGTGTCAT CGGCCATACC
GATAACGTGC CGGTCCAGCG CAGCAATCCC TTCGCCTCGA ACCAGGGCCT GTCCGAGGCC
CGCGCCGCCA CTCTCGCGGC CCTCCTCGTC GAGGGCGGCG TGCCCGCGGG GATCGTCACC
GCCGAAGGCC ATGCCGACAC CGAGCCGGTC GCCGACAATG CCACGCGCGC GGGCCGGGCG
CAGAACCGCC GCGTCGAGAT CCGCATCGAG AAGAGGCTCT AA
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| Protein sequence | MTREDDPFGL ATDAARTRIR PSPAERARRA AAGPAPAEVG AVAPVRPAHG RTHPNPLVAS
FAVLLELAPA LEGAAPPQEP GMLRARLRDG LTEARDRSVA QGVPLARADR AAWFVAALLD
DLALNTPWGA ASGWPRQPLV TELSGEVDAG TRFFDRLEEL ARHPTLDPQL LELVWLCLSL
GFRGKHRTGR EGGESALFAL RTGVARLLRN PEATAAPLSP HWEGVAAPDA PRRFAVPVWT
VGLAALALMA ALYTGLSLQL SARAEKLFDL AALVPPAERA ALFRPPRETV APPPEIRVEP
VVIELLPAFR ARAPAATAAA LQGREDAQLT ILTLQGTDPE LFRSARAEVN PDYAPLVASV
AAVLAENREL VGAVRVIGHT DNVPVQRSNP FASNQGLSEA RAATLAALLV EGGVPAGIVT
AEGHADTEPV ADNATRAGRA QNRRVEIRIE KRL
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