Gene Rsph17029_3108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3108 
Symbol 
ID4898142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp122449 
End bp123090 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content72% 
IMG OID640113710 
ProductAsp/Glu racemase 
Protein accessionYP_001044980 
Protein GI126463867 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4126] Hydantoin racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0539324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.209365 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCGCA TCCTCGTCAT CAACCCCAAC TCCTCGACCG CCGTCACCGA GGGGTTGCGC 
GAGGCGCTCG CCCCCTTCGA GGGGTCCCTC CGTTTCGACT GCATCGAGAT CGCCGAGAGC
CCGGCCACGA TCTTCACCGA AGAGGATGTG GCGCGCGCGG GCCTGGGCGT CGCCGAGCGC
ATCCGCCAGA ACCCCGGGGC CGATGGCTAT ATCATCGCCT GCTTCTCGGA TCCGGGGCTC
GATCTCGCCC GCTCGATCAC CGCGAAACCC GTCTTCGGCT GTCAGGAGGC GGGGATCCTC
ACCGCGATGG CCCGTGCCGA CCGCTTCGCC ATCGTGGCGC TGGGGCCGGC GTCCGTCGCG
CGCCACATGC GCCGGATGCG CGCCATGGGC GTTCTGGGCC GGCTCGCGGG CGAGCTCGAT
CTGGGCGGGG TCAGCGCCGA GGATGCGGGC CGCTCGGATG CGGTCTATGC CTGCACGCTG
GCCGTAGGGC AGGAGCTGGT GCGGATGGGC GCAGGTGCCC TCGTGCCCGG CTGCGCGGGC
TTTGCGCCCC GCCGCGCCCA GCTCGAGCGC GATCTCGGCA TCGCGGTCGT CGATCCGGTG
CTGGCCGCCG CAGGCATGGC CATGGGCGCG GTGCTGGCGT GA
 
Protein sequence
MKRILVINPN SSTAVTEGLR EALAPFEGSL RFDCIEIAES PATIFTEEDV ARAGLGVAER 
IRQNPGADGY IIACFSDPGL DLARSITAKP VFGCQEAGIL TAMARADRFA IVALGPASVA
RHMRRMRAMG VLGRLAGELD LGGVSAEDAG RSDAVYACTL AVGQELVRMG AGALVPGCAG
FAPRRAQLER DLGIAVVDPV LAAAGMAMGA VLA