Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3108 |
Symbol | |
ID | 4898142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | + |
Start bp | 122449 |
End bp | 123090 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640113710 |
Product | Asp/Glu racemase |
Protein accession | YP_001044980 |
Protein GI | 126463867 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4126] Hydantoin racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0539324 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.209365 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGCGCA TCCTCGTCAT CAACCCCAAC TCCTCGACCG CCGTCACCGA GGGGTTGCGC GAGGCGCTCG CCCCCTTCGA GGGGTCCCTC CGTTTCGACT GCATCGAGAT CGCCGAGAGC CCGGCCACGA TCTTCACCGA AGAGGATGTG GCGCGCGCGG GCCTGGGCGT CGCCGAGCGC ATCCGCCAGA ACCCCGGGGC CGATGGCTAT ATCATCGCCT GCTTCTCGGA TCCGGGGCTC GATCTCGCCC GCTCGATCAC CGCGAAACCC GTCTTCGGCT GTCAGGAGGC GGGGATCCTC ACCGCGATGG CCCGTGCCGA CCGCTTCGCC ATCGTGGCGC TGGGGCCGGC GTCCGTCGCG CGCCACATGC GCCGGATGCG CGCCATGGGC GTTCTGGGCC GGCTCGCGGG CGAGCTCGAT CTGGGCGGGG TCAGCGCCGA GGATGCGGGC CGCTCGGATG CGGTCTATGC CTGCACGCTG GCCGTAGGGC AGGAGCTGGT GCGGATGGGC GCAGGTGCCC TCGTGCCCGG CTGCGCGGGC TTTGCGCCCC GCCGCGCCCA GCTCGAGCGC GATCTCGGCA TCGCGGTCGT CGATCCGGTG CTGGCCGCCG CAGGCATGGC CATGGGCGCG GTGCTGGCGT GA
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Protein sequence | MKRILVINPN SSTAVTEGLR EALAPFEGSL RFDCIEIAES PATIFTEEDV ARAGLGVAER IRQNPGADGY IIACFSDPGL DLARSITAKP VFGCQEAGIL TAMARADRFA IVALGPASVA RHMRRMRAMG VLGRLAGELD LGGVSAEDAG RSDAVYACTL AVGQELVRMG AGALVPGCAG FAPRRAQLER DLGIAVVDPV LAAAGMAMGA VLA
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