| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3107 |
|---|
| Symbol | |
|---|
| ID | 4898141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | + |
|---|
| Start bp | 120995 |
|---|
| End bp | 122452 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640113709 |
|---|
| Product | dihydropyrimidinase |
|---|
| Protein accession | YP_001044979 |
|---|
| Protein GI | 126463866 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0044] Dihydroorotase and related cyclic amidohydrolases |
|---|
| TIGRFAM ID | [TIGR02033] D-hydantoinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0154348 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.387617 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTTCG ATACGGTCAT CCACGGCGGC ACCATCGTCA CGCCGACCGA AAGCTGGCAG
GGCGATCTGG GCCTCGTGGG GGGCCGGATC GCGGCTCTGG CCGAGCGGCT GCCCGGCGGC
GCGCGCCGGA TCGACGCCAC CGGGCGGCTC GTCCTTCCCG GCGGCATCGA GGCGCACGCC
CATATCGCGC AGGAAAGCTC CTCGGGGCTG ATGAGCGCGG ACGACTATTA CACGGGCTCG
GTCTCGGCGG CCTTCGGCGG CAACTCGAGC TTCATCCCCT TCGCGGCCCA GCACCGCGGG
CAGTCGGTGG ATGCGGTGAT CGAGACCTAC GACAGCCGGG CGGCGCCGAA CTCGGTGCTC
GACTATTCCT ACCATCTCAT CATCTCGGAC CCGACCGAGA CCGTCCTGAC CGAAGAGCTG
CCGCGCGCCT TCGCCCGCGG CATCACCTCG TTCAAGGTCT TCATGACCTA CGATCTGATG
AACCTCGGCG ACCGCGGGAT GCTCGACATC CTGACCGTCG CCCGCCGTCA CGGCGCGCTC
ACCATGGTCC ATGCCGAGAA CAACGACATG GTGAAATGGA TGAACGCGCG CCTCGCCGCG
GCGGGGCTCA CGGCGCCGAA ATATCATGCG ATCTCGCGCC CGGCGCTGGC CGAGGCCGAG
GCGATCAACC GCGCGATCTC GCTCGCGCGG CTGGTGGGAG CGGGGCTCTT CATCGTCCAT
GTCTCGACGC CCGAGGGGGC GGATCTCGTG GCCCGCGCGC AGGCCTCGGG TCTGCCGATC
CATGCCGAGA CCTGCCCGCA GTATCTGGCC TTCACCCGTG CCGACCTCGA CCGGCCGGGG
ATGGAGGGGG CCAAATACAT CTGCTCGCCC CCCCTGCGCG ATGCGGCGAC GCAGGCCGCG
CTCTGGAACC ATGCCCGGCG CGGCACCTTC GAGAGCGTCT CCTCGGACCA TGCCCCCTAC
CGGTTCGACG CGAGCGGCAA GTTCGCCAAC GGCGCAGAGC CCGCCTATCC CGCCATCGCC
AACGGCCTGC CCGGCATCGC CATGCGCCTG CCCTATCTCT TCTCCGAAGG GGTCGCGGCC
GGGCGGATCA GCCTCCAGCA GTTCGCGGCC CTCTCTTCCT CGAACGCCGC CCGCCTCTTC
GGAATGGAGC GCAAGGGCGC GCTGCTGCCG GGCTATGACG CCGACATCGC GATCTGGAAC
CCCGAGGAAA CGCGCGAGGT CTCGCTCGCC GATCAGCACG ATGCCATGGA CTACACACCC
TTCGAGGGGA TGCGCCTCAC CGGCTGGCCC GAACATGTGC TGAGCCGCGG CGAGACGGTG
GTCGAGGCGG GCGAGCTGAA GGCCGCCCGC GGGCGCGGCC GCTTCGTGGC GCGTGCCCCC
TACCGCCCCG ATCCCAACGC GCCGGTCGAG CCCGAGCTCA CCCCCGCGCT CAACTTCGGC
GCGGAGATCC GGCCGTGA
|
|---|
| Protein sequence | MEFDTVIHGG TIVTPTESWQ GDLGLVGGRI AALAERLPGG ARRIDATGRL VLPGGIEAHA
HIAQESSSGL MSADDYYTGS VSAAFGGNSS FIPFAAQHRG QSVDAVIETY DSRAAPNSVL
DYSYHLIISD PTETVLTEEL PRAFARGITS FKVFMTYDLM NLGDRGMLDI LTVARRHGAL
TMVHAENNDM VKWMNARLAA AGLTAPKYHA ISRPALAEAE AINRAISLAR LVGAGLFIVH
VSTPEGADLV ARAQASGLPI HAETCPQYLA FTRADLDRPG MEGAKYICSP PLRDAATQAA
LWNHARRGTF ESVSSDHAPY RFDASGKFAN GAEPAYPAIA NGLPGIAMRL PYLFSEGVAA
GRISLQQFAA LSSSNAARLF GMERKGALLP GYDADIAIWN PEETREVSLA DQHDAMDYTP
FEGMRLTGWP EHVLSRGETV VEAGELKAAR GRGRFVARAP YRPDPNAPVE PELTPALNFG
AEIRP
|
|---|
| |