| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3101 |
|---|
| Symbol | |
|---|
| ID | 4899097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | + |
|---|
| Start bp | 115557 |
|---|
| End bp | 116483 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640113703 |
|---|
| Product | dihydrodipicolinate synthetase |
|---|
| Protein accession | YP_001044973 |
|---|
| Protein GI | 126463860 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.504533 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAAC GGATCAACCG CGACACGCGC GGCGTCTATA TCATCGCCGC GACCCCCTTC
ACGGATCGGG GCGAGATCGA CCACGACAGC CTCCTCAGCC TCGTCGATTT CTACATCGGC
CACGGCGTGA CGGGCCTCAC CATCCTCGGC ATGATGGGCG AGGCGAACAA GATGACCGGC
GACGAACGCC GCGCGGTGAT CGACACGGTG CTCTCGCGCG CGGGCGACCT GCCGGTGGTG
GTGGGCGTCT CGGACGCGGG CCTCGCCAAC CTCACCGATC TGGCCTCCTA CGCGATGGAC
AAGGGCGCGG CCGGGGTCAT GGTGGCCCCA TCGGCCGGCC CGGCCCGCGA GGACCGGATC
GAGGGCTATT TCCATGCCGT CTGCGAGGCG CTCGGGCCTG AGGTGCCGGT CTGCTTCCAG
GACTTCCCGC TGGCCACGGG CCTGCCGGTC TCTCCCGCCC TCATCCGCCG CCTCTCGCAG
GAGCGCGACC AGATCGTCAT GCTCAAGCAC GAGGACTGGC CGGGGCTCAC CAAGATCACC
CAGCTGCGCA AGCAGGAGGA GGCGGCCGGC GTCGCCCGGC TCTCGATCCT CTGCGGCAAC
GGCGGGCTCT ATCTGCCGCA GGAGCTGCAA CGGGGCGCCG ACGGCGCCAT GACGGGCTTT
GCCTATCCCG AGGCGCTGGT CCAGACGGTC GCGCTGCATC ACGCGGGCCG CGTGGACGAG
GCCGAGGATC TCTTCGACCG CTACATCCCC ATCCTGCGCC ACGAGCAACA GCCGGGCTTC
GGCCTCGCGG TGCGCAAATA TGTGCTGATG AAGCGCGGCG CGATCGCCTC GGCCGCCACG
CGCGCGCCGG GACCGAAGAT GTCGGCCGTC GACGCGGCCG AGACCGACCG GCTGATGGCC
CGTCTCGAGG CGCGGCTGAA AGGCTGA
|
|---|
| Protein sequence | MAERINRDTR GVYIIAATPF TDRGEIDHDS LLSLVDFYIG HGVTGLTILG MMGEANKMTG
DERRAVIDTV LSRAGDLPVV VGVSDAGLAN LTDLASYAMD KGAAGVMVAP SAGPAREDRI
EGYFHAVCEA LGPEVPVCFQ DFPLATGLPV SPALIRRLSQ ERDQIVMLKH EDWPGLTKIT
QLRKQEEAAG VARLSILCGN GGLYLPQELQ RGADGAMTGF AYPEALVQTV ALHHAGRVDE
AEDLFDRYIP ILRHEQQPGF GLAVRKYVLM KRGAIASAAT RAPGPKMSAV DAAETDRLMA
RLEARLKG
|
|---|
| |