Gene Rsph17029_3093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3093 
Symbol 
ID4898391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp108292 
End bp108954 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content70% 
IMG OID640113695 
ProductGntR family transcriptional regulator 
Protein accessionYP_001044965 
Protein GI126463852 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.183416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.744122 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCCC CCAGACCGCT CGCCCACGAG GCCTATCAGC GCATCATCTC GATGATCTTC 
GAAGGCGCGC TGAAATCGGG CGACCTGTTG CAGGAGGCCG CCCTGGGCGA GGTCTTCGGC
ATGTCGCGCA CCCCCGTGCG CGAGGCGATC AAGCGGCTGG AGAGCGAGGG CCTCGCCGTC
GTCGAGGGCC GCTTCACCTG CGTGCGCAGC GTGACGGCCG CCGATGTCGA GGAGGTCTTC
TTCCTCCGGC TGGAGCTCGA ACCGCTCGCG GCGCGCTCGG CGGTGCGGCT GCCGCCCGCT
CAGGTCGATG CGATGGAGGA GCGCGTGCGC CTCCTGATGG CGTCGGACCC GGCGGTCAAC
GATCTCCAGC GCCAGACCGA CTACGAGTTC CACCACCTGC TGGGGCGCGA GTTCGGCAAT
CAGGCCGTGG CCCAGACGGT GGCCACGCTG CATCGGCGCA CCTGCATCTT CGACCACACT
CAGGTGCCCG AACGGTTCCT GCGCGGCTGC GAGGAACATC TGGAGATCCT CGAAGCCGTG
CGCAGCGGCA ATGCCGACGC GGTCGAGGCC GGGCTGCGGG CCCATCTCGA ACATGCGCGC
GACGCCGTGC TCCTCCGTCT GCGCCGCGCT GCCGCGGCGA CCGCTTCCGC GAGTGCCTCA
TGA
 
Protein sequence
MSAPRPLAHE AYQRIISMIF EGALKSGDLL QEAALGEVFG MSRTPVREAI KRLESEGLAV 
VEGRFTCVRS VTAADVEEVF FLRLELEPLA ARSAVRLPPA QVDAMEERVR LLMASDPAVN
DLQRQTDYEF HHLLGREFGN QAVAQTVATL HRRTCIFDHT QVPERFLRGC EEHLEILEAV
RSGNADAVEA GLRAHLEHAR DAVLLRLRRA AAATASASAS