Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3090 |
Symbol | |
ID | 4898191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | - |
Start bp | 105391 |
End bp | 106026 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640113692 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001044962 |
Protein GI | 126463849 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.268358 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.787214 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCCG AGACGCTCTC GCACAGCGCC TACCGCCGCC TCCGCGAGGA TATTCTCGAG GGGCGGATCG CGCCCAACAC CATCCTGACC GAGCGCGAGC TGGCCGAGCG GCTGGGCATC TCGCGCACGC CGCTGCGCTC GGCTTTGTCG GTGCTCGAGC GCGAGCAGGT GATCGAGCGG ATGGTGAACG GCACGCTGCT GGTGCGGCTC GTCTCGGTCG AGCAGCTGCT CGACATCATC CAGCTCCGGC TGATCCTCGA GCGGGCCGCC GCGCGCCGGG CGGCGGGCTT CGGCCTCACG CCCGAGCTCG AGGCCGCGCG CGAGGCACAG CTGCGCTATC TCGGCGCGGG GGCGATGGAT TTCGAGCGCT TCTGGCAGGA TGACGGCATC TTCCACCGGG CGGTGGCGCT GGCGGCGGGG CTCACGCTTC TGCCGGGGCT TCTCGCCGAG CAGCGCGCCA TCGTGCGGCG CAGCACCATC ATCCGCACCC ACACCAACTT TGCCGATCAG GCGCGGGAAC ATATCGCGGT GATCGACGCG ATCGCCGGCC GCGACGCCGA GGCCGCCGCG GCCGCCATGG CGCTTCATTT CGACCGCATG CGCGCCCGCA CGCTGGGCTG GCTCAACAAG GACTGA
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Protein sequence | MSSETLSHSA YRRLREDILE GRIAPNTILT ERELAERLGI SRTPLRSALS VLEREQVIER MVNGTLLVRL VSVEQLLDII QLRLILERAA ARRAAGFGLT PELEAAREAQ LRYLGAGAMD FERFWQDDGI FHRAVALAAG LTLLPGLLAE QRAIVRRSTI IRTHTNFADQ AREHIAVIDA IAGRDAEAAA AAMALHFDRM RARTLGWLNK D
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