Gene Rsph17029_3085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3085 
Symbol 
ID4898168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp100438 
End bp101223 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content72% 
IMG OID640113687 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001044957 
Protein GI126463844 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.696622 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.57076 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTGG GCATCAGAGG CAAGACGGCG CTGGTTCTGG GCGCGGGCGG GGGCCTCGGC 
GGCGCCATCG CCCGCTCGCT CGCCCGCGAG GGCGCGCGAG TGGCGCTCGG CGACATCGAC
CTCGCCGCGG CCGAAGCCAC CGCCGAGGCG ATCCGGGCCG AGGGCGGCAC GGCGCTGCCG
CTCGCCTGGG ATCTGGCCGA CCTCGGCGCC ATCGAGACGA ACGTGAGCCT GATCGAGGCC
GAGTTCGGCC CGGTCGACAT CCTCGTGAAC AACACGGGCG GGCCGAAGCC CTCGCCGGTC
TCGGGGCAGG AGGCCGCGCT CTGGCGCACG AGCTTCGAGT CCATGGTGCT CTCGGTCATC
TCCATCACCG ACCGCGTGCT GCCGGGCATG AAGGCCCGCA AATGGGGCCG CATCATCACC
TCGACCTCGT CGGGCGTGGT GGCGCCGATC CCGAACCTCG GCCTGTCGAA CGCGCTGCGC
ATCTCGCTCG TGGGCTGGTC GAAGACGCTC GCGCGCGAGG TGGGCCGCGA CGGCATCACG
GCCAACATCG TGCTGCCCGG CCGCGTCGCC ACCAAGCGCA TCACCTTCCT CGACGAGCAG
AAGGCCGCGC GCGAAGGCCG TGCCGTGGCC GAGGTGGCCG CCGAGAGCGT GGCCTCGATC
CCGCTCGGCC GCTATGGTCA GCCCGAGGAA TATGGCGATG CCGTGGCCTT CCTCGCCTCG
GCCCGCGCCT CCTACATCAC CGGCAGCACC ATCCGCATCG ACGGCGGCCT GATCGCCAGC
GTCTGA
 
Protein sequence
MDLGIRGKTA LVLGAGGGLG GAIARSLARE GARVALGDID LAAAEATAEA IRAEGGTALP 
LAWDLADLGA IETNVSLIEA EFGPVDILVN NTGGPKPSPV SGQEAALWRT SFESMVLSVI
SITDRVLPGM KARKWGRIIT STSSGVVAPI PNLGLSNALR ISLVGWSKTL AREVGRDGIT
ANIVLPGRVA TKRITFLDEQ KAAREGRAVA EVAAESVASI PLGRYGQPEE YGDAVAFLAS
ARASYITGST IRIDGGLIAS V