Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3085 |
Symbol | |
ID | 4898168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | + |
Start bp | 100438 |
End bp | 101223 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640113687 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001044957 |
Protein GI | 126463844 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.696622 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.57076 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATCTGG GCATCAGAGG CAAGACGGCG CTGGTTCTGG GCGCGGGCGG GGGCCTCGGC GGCGCCATCG CCCGCTCGCT CGCCCGCGAG GGCGCGCGAG TGGCGCTCGG CGACATCGAC CTCGCCGCGG CCGAAGCCAC CGCCGAGGCG ATCCGGGCCG AGGGCGGCAC GGCGCTGCCG CTCGCCTGGG ATCTGGCCGA CCTCGGCGCC ATCGAGACGA ACGTGAGCCT GATCGAGGCC GAGTTCGGCC CGGTCGACAT CCTCGTGAAC AACACGGGCG GGCCGAAGCC CTCGCCGGTC TCGGGGCAGG AGGCCGCGCT CTGGCGCACG AGCTTCGAGT CCATGGTGCT CTCGGTCATC TCCATCACCG ACCGCGTGCT GCCGGGCATG AAGGCCCGCA AATGGGGCCG CATCATCACC TCGACCTCGT CGGGCGTGGT GGCGCCGATC CCGAACCTCG GCCTGTCGAA CGCGCTGCGC ATCTCGCTCG TGGGCTGGTC GAAGACGCTC GCGCGCGAGG TGGGCCGCGA CGGCATCACG GCCAACATCG TGCTGCCCGG CCGCGTCGCC ACCAAGCGCA TCACCTTCCT CGACGAGCAG AAGGCCGCGC GCGAAGGCCG TGCCGTGGCC GAGGTGGCCG CCGAGAGCGT GGCCTCGATC CCGCTCGGCC GCTATGGTCA GCCCGAGGAA TATGGCGATG CCGTGGCCTT CCTCGCCTCG GCCCGCGCCT CCTACATCAC CGGCAGCACC ATCCGCATCG ACGGCGGCCT GATCGCCAGC GTCTGA
|
Protein sequence | MDLGIRGKTA LVLGAGGGLG GAIARSLARE GARVALGDID LAAAEATAEA IRAEGGTALP LAWDLADLGA IETNVSLIEA EFGPVDILVN NTGGPKPSPV SGQEAALWRT SFESMVLSVI SITDRVLPGM KARKWGRIIT STSSGVVAPI PNLGLSNALR ISLVGWSKTL AREVGRDGIT ANIVLPGRVA TKRITFLDEQ KAAREGRAVA EVAAESVASI PLGRYGQPEE YGDAVAFLAS ARASYITGST IRIDGGLIAS V
|
| |