Gene Rsph17029_3081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3081 
Symbol 
ID4898176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp96472 
End bp97353 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content73% 
IMG OID640113683 
ProductLysR family transcriptional regulator 
Protein accessionYP_001044953 
Protein GI126463840 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.294093 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.575157 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCC GCTTTCTCGA GAGCTTCGTG GCGGTCGCCG ATTGCGGCTC CATCGCCGAG 
GCCGCGCGGC GGCTGAACCT GACGCCTGCC GCCCTGTCGC AGCGGCTGCG CACGCTCGAG
CAGGATCTGG GCCATTCCCT CGTGATGCGC GCGGGGCGGC GGGTGCGGCC CACGGCCTCG
GGGTTGGCCG TGCTCGACCA TGCCCGCGCT CTGATCGAGG GGGCGCGCGA CCTCCGCGCC
ATCGCGGCGC AGGACGAGCC CGCGGGCCAG CTGCGCCTCG GCGCCATCGC CACCTCGCTG
ACCGGGCTTC TGCCCGGCAT CGTCGCCCGC CTGCGCGCGC GCCATCCGCG GATCGAATAT
CACATCCGGC CGGATTCCTC GGTGAACCTC TATCACGGGG TGATTGCGGG CGATCTCGAT
GCGGCGGTGA TCGTGCGCCC GCAGTTTCCG GTGCCGAAAT CGACCGGCTG GCTCACGCTG
CGCGAGGAGC CGCTGGTGCT TCTGGTGCCC GAGGAGGCGC CGGGTACCGA TCCGCTCGCC
ATCCTCCAGA GCCATCCGTT CATCCGCTAC GACCGCAACC AGTGGGGCGG GCAGATCGTC
GATCGCTACC TGCGCCAGAA CACGCTGAAG GTCCGCGAGT GGCTGGAGCT CGATGCGCTC
GATGCCATCG CGGGCCTCGT GAGCCGGGGC CTCGGCGTGG CCATCGTGCC GGACTGGGCG
CCGCCCTGGC CCGAGGGGTT GAGGCTGCGC AAGATCGCCC TGCCGGATGC GGGCGGGCGG
CAGACGGGGG TGCTGTGGAA CCTCTCGGGC GCGCGCATCG CGGCCATGCA GGCCTTCGTC
GAGGCCTGCC GCGCGCGCGG CGCGCCGGCG CCGGGGCCGT AA
 
Protein sequence
MDIRFLESFV AVADCGSIAE AARRLNLTPA ALSQRLRTLE QDLGHSLVMR AGRRVRPTAS 
GLAVLDHARA LIEGARDLRA IAAQDEPAGQ LRLGAIATSL TGLLPGIVAR LRARHPRIEY
HIRPDSSVNL YHGVIAGDLD AAVIVRPQFP VPKSTGWLTL REEPLVLLVP EEAPGTDPLA
ILQSHPFIRY DRNQWGGQIV DRYLRQNTLK VREWLELDAL DAIAGLVSRG LGVAIVPDWA
PPWPEGLRLR KIALPDAGGR QTGVLWNLSG ARIAAMQAFV EACRARGAPA PGP