Gene Rsph17029_3063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3063 
Symbol 
ID4898991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp75998 
End bp76918 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content71% 
IMG OID640113665 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_001044935 
Protein GI126463822 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.13528 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTTC ACAGCGACTT CATCGGACAG ACGGACGGGA TCGATCGCAC CGCGCCGGTG 
CGGTGGCGCC GGATGGAGGG CGCGACCAGC GTCTTCTGGC AGGCCCGCGG CGTGCGGGGC
GGACGGGGCT ACTATCTCTC GCAGCATCCG CGGATCATGG TCTTTCTCGA CGAGGTCTCC
TCGATCCGGC TGTCGAACGA CTCCGGCGGC CGGGCGCATC TGGGCCGGGC GCTGCCGCGC
GTGCTCTATG TGCCCGCCGG GCTGCCGATG TGGACCCATT TCACCTGCGA CCACAGCTTT
GCCCATCTCG ACCTGCATCT GCACCGCGAC CGGCTGTTGA AGATGCTGAC CCCGGCCCTC
GGCCGGTCCG CGGCGCTCGA CGTCCTCGCC CGTCCGGTCG AGAGCGAGGC GACGCGGTCC
CTTCTGACAC TGGCGGAGCT TCTGGTGGAG GAGACGGTCG CGCCTGCGCA TCATCGGATC
CATGCCGAGA CGCTGGCCGC GGGCCTTGTC ACCGGGCTTC TGGATCTCGC GTCGGGAGAG
GAGGCCATGA GCCGCACCCG GCTGACGCAG GGCCAGATCC GCAAGCTCGA GCGCGCCTTC
CGGGCGGGGG GCGGGCGCGG CCAGTCGGTG GCCGAGATGG CGCAGGTGGT GGGCCTGTCC
GAGAGCTGGT TCACCCGGCT CTTCCGCGAC ACGACCGGGG TCACGCCGCT GCAATGGCAG
CTGCGCCAGC GGGTCGAGCT GGCGCAGACC CTTCTCGAGG AGAACCTCAG CGTGGCCGAG
ATCGCCGACC GCTTGGGCTT CAGCGATCAG GCGCATCTGA CGCGCGTCTT CCGTCAGGTG
ACGGGTCAGC CGCCTGGCGC CTGGCGCCGC GCCCGACTCT GCGCGGCGGC GCCCGAAAGC
GGGGCGGCGC GCCGGGCCTG A
 
Protein sequence
MSFHSDFIGQ TDGIDRTAPV RWRRMEGATS VFWQARGVRG GRGYYLSQHP RIMVFLDEVS 
SIRLSNDSGG RAHLGRALPR VLYVPAGLPM WTHFTCDHSF AHLDLHLHRD RLLKMLTPAL
GRSAALDVLA RPVESEATRS LLTLAELLVE ETVAPAHHRI HAETLAAGLV TGLLDLASGE
EAMSRTRLTQ GQIRKLERAF RAGGGRGQSV AEMAQVVGLS ESWFTRLFRD TTGVTPLQWQ
LRQRVELAQT LLEENLSVAE IADRLGFSDQ AHLTRVFRQV TGQPPGAWRR ARLCAAAPES
GAARRA