| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3061 |
|---|
| Symbol | |
|---|
| ID | 4898966 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | - |
|---|
| Start bp | 72433 |
|---|
| End bp | 73410 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640113663 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_001044933 |
|---|
| Protein GI | 126463820 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.260153 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.218558 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATCCA TCCTCTTTCG CCCGCTCGTC ATAGCGCTTC TGGCCCTCGC GCCCGCTGCG
GCGGCACAGG ACTTTCCGCT GGCCATCGAC CATGCCTTCG GCCGCACCGT GATCCCCGAG
CGCCCCGTCC GGGTCGCCAC GGTCGCCTGG GCCAACCACG AGGTGCCTCT CGCGCTCGGC
GTGGTGCCGG TGGGCTTCGC CCGCGCCAAC TTCGGCGACG ACGACGGGGA CGGGCTGCTG
CCCTGGGTCG CCGAACGGCT GGAGGAGCTG GGCGCCGAGG CGCCGCCGCT CTTCGACGAG
GGTGACGGGA TCGACTTCGA GGCGGTGGCG GCGAGCGCCC CCGACGTGAT CCTCGCCGCC
TATTCCGGCC TCAGCCGCGC CGATTACGAG ACGCTGAGCG AGATTGCCCC GGTGGTGCCC
TACCGCGAGT CGCCCTGGGC CACCGACTGG CGCGAGATGA TCCGGCTGAA CGGCGCCGCG
ATGGGGCTGG CCGCCGAGGG CGAGGCTCTC ATCGGGCGCA TCGAGGGCGA GATCGCCGAG
ACGGTCGCGC GCCATCCCGA GATCCGCGGC AGGACGGCGA TGTTCGCCAC CCATCTCGAC
ATCCGCGATC TGAGCGTGAT CCGCTTCTAT TCCGCGACCG ACACGCGGGT GAAGTTCTTC
GAGGATCTGG GCCTCGTCAC GCCAGAGAGC GTGCGCGAAG CCTCGTCCGG CGGAACCTAT
GCCGCCGAGG CCAGCGCCGA GCGGATCGAC CGGTTCGACG ATGTCGACAT TCTCGTGACC
TACGGCGGCG AGCCGCTGCG CGAGCGCGTG TCTGAGAACC CGCTCACCTC GCGGATGAAG
GCGGTGTCGC AAGGGGCGCT CGTGCTGCTC GGCAACGATC CGGTGGGCAC GGCCGCCAAT
CCGACGCCGC TCTCGATCTC CTGGGTGCTC GAGGATTATG TCGGGCGGCT GGCCGAAGCC
GCGCGCCGCG TGCCATGA
|
|---|
| Protein sequence | MPSILFRPLV IALLALAPAA AAQDFPLAID HAFGRTVIPE RPVRVATVAW ANHEVPLALG
VVPVGFARAN FGDDDGDGLL PWVAERLEEL GAEAPPLFDE GDGIDFEAVA ASAPDVILAA
YSGLSRADYE TLSEIAPVVP YRESPWATDW REMIRLNGAA MGLAAEGEAL IGRIEGEIAE
TVARHPEIRG RTAMFATHLD IRDLSVIRFY SATDTRVKFF EDLGLVTPES VREASSGGTY
AAEASAERID RFDDVDILVT YGGEPLRERV SENPLTSRMK AVSQGALVLL GNDPVGTAAN
PTPLSISWVL EDYVGRLAEA ARRVP
|
|---|
| |