Gene Rsph17029_3059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3059 
Symbol 
ID4899071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp70221 
End bp71261 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content73% 
IMG OID640113661 
Producttransport system permease protein 
Protein accessionYP_001044931 
Protein GI126463818 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4779] ABC-type enterobactin transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.128595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCCCG CACCTTCCCT TGCCGCCGAG GTCGCGGCCC ACCGACGCCG CCGCCTGCGC 
CGGGGCGCAG CCCTCGTGCT CGTCCTTGCC CTCCTGATCC TCGCATCGGT GGCGCTGACC
CTCTCGGTCG GCTCGACGCC CGTGGCGCCC CTCGACGTGC TCCGCGTGCT GGCCGGGCAG
GAGGTGCCGG GCGCCTCCTT CACCGTCGAG CGGCTGCGGC TGCCGCGCGC GGTGCTGTCC
CTTCTGGCCG GCCTCTGCTT CGGCTTGGGC GGCGCCGCCT GCCAGACCCT GCTCCGCAGC
CCGCTGGCCA GCCCCGACAT CATCGGCATC TCGGCAGGCA GCGGGGCCGC CGCCGTCTTC
GCCATCGTGG TCCTGGGCTG GAGCGGGCCT GCCGTCTCGG GCGCAGCCAT CCTCTGCGGG
CTCGCCACCG CGCTTGCGAT CTATCTCCTG GCCTGGCGGG ACGGGGTGGC AGGCGCGCGG
CTGATCCTCG TGGGGATCGG GATCTCTGCC ATGCTGCAGA GCGTGACCGC CTATCTCCTC
CTGCGCGCCC CGGACTGGAG TCTGCAGGAG GCGATGCGCT GGATGACAGG CAGCGTGAAC
GGCGCCCGGC TGTCGGACGC ACCGCCCCTC CTGCTGGCGC TCGGCCTGTT CGGAACGCTC
CTCCTGTGCC AGAGCCGCGA GCTCGAGGCC CTGCGGCTCG GCGACGACAA GGCCGCGGCG
CTCGGCGTGC GGATCGCGCG GACGCGGCTC CTGATCCTCG TGGGCGTGGT CGGACTGACC
GCGGTGGCGA CCGCCGTCGC GGGCCCGATT GCCTTCGTGG CCTTCCTCGC CGGTCCCATC
GCCGCGCGTC TGGGCATGCC GGGTCGGCCG ATCCTGCTGC CGGCCGCGCT GATCGGCGCG
CTTCTCGTGC TGCTGGCCGA TTTCGCGGGG CAGGTGCTTC TGCCCGGCCG CTATCCGGTC
GGAATCGTCA CTGGCGCCCT CGGCGCGCCT TACCTCATCT ATCTCATCGT CCGGGTGAAC
CGGGCCGGAG GCACCATATG A
 
Protein sequence
MIPAPSLAAE VAAHRRRRLR RGAALVLVLA LLILASVALT LSVGSTPVAP LDVLRVLAGQ 
EVPGASFTVE RLRLPRAVLS LLAGLCFGLG GAACQTLLRS PLASPDIIGI SAGSGAAAVF
AIVVLGWSGP AVSGAAILCG LATALAIYLL AWRDGVAGAR LILVGIGISA MLQSVTAYLL
LRAPDWSLQE AMRWMTGSVN GARLSDAPPL LLALGLFGTL LLCQSRELEA LRLGDDKAAA
LGVRIARTRL LILVGVVGLT AVATAVAGPI AFVAFLAGPI AARLGMPGRP ILLPAALIGA
LLVLLADFAG QVLLPGRYPV GIVTGALGAP YLIYLIVRVN RAGGTI