Gene Rsph17029_3053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3053 
Symbol 
ID4898459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp64096 
End bp64980 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content69% 
IMG OID640113655 
Productdihydrodipicolinate synthetase 
Protein accessionYP_001044925 
Protein GI126463812 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.466068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0327331 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCA ACGCCCATGT CGCCCTCGTG ACCTGCTTTC ACGAGGACGA GACCGTCAAC 
TATGCAGCCA CCCGCGCCCA GGTGCGCCGC CAGCTGGCCG CCGGCAACGA TCTCATGGTC
TGCGGCACGA ACGGCGACTT CTCGGCCCTG ACCCATGACG AGAAGATCCG TCTGGTGGGA
GAGGTGATGG AGGAAGTGGC GGGCCGCGCG AAGGTCATCG CCAATGTCGG CTGCCCCGCC
ACCTTCGAGA CGCTCCAGCT CGCCCGCGCG GTGGACGGGA TGGGCCTGCA CGGCATCGCG
GTCATTGCGC CCTACTTCAT CTCCTGCACG CAGGACGGGC TGATCCGGCA TTTCTCGACC
GTCGCCGATG CCGTGACGAC GCCGGTCTAT CTTTACGACA TCCCGGCCCG CACCCAGAAC
CATATCGAGC CCGCCACGGT GGGCACGCTC GCCCGCCATG GCAACATCGC GGGGATCAAG
GATTCCGGCG GCGCGACCGA CACGGTGCGC GCCTATCTCG ACGTGGCGCG CGACGTGGAC
GGGTTCGAGG TCTACTGCGC GCCCGACCAT CTGGTGCTCT GGGGCCTCGA GGAAGGCTGC
GCGGGCGTCG TCTCGGGGCT CGGCAACGTG GCTCCGGGCC TGCTGGCGCA GATCATCGCG
GGCTTCAACG CGGGCGACAT GGAGGCCGCC CGCGCGGCGC AGGAAAATTT CGCGGGACTG
CGGAAGGACC TCTATGCCTT GGGCTTCCCG CCGGCGCTCG TCAAGCGCGC GCTCTATCTG
AACGATCCTT CGGTCGGCCT CTCCCGGCAG CCCGCGCTGC TGCCCGACGC GGCGCAGGAC
GCGCAGATCC TCGCCATCCT CACCGCGCGG GGCCTGAAGG AATGA
 
Protein sequence
MTRNAHVALV TCFHEDETVN YAATRAQVRR QLAAGNDLMV CGTNGDFSAL THDEKIRLVG 
EVMEEVAGRA KVIANVGCPA TFETLQLARA VDGMGLHGIA VIAPYFISCT QDGLIRHFST
VADAVTTPVY LYDIPARTQN HIEPATVGTL ARHGNIAGIK DSGGATDTVR AYLDVARDVD
GFEVYCAPDH LVLWGLEEGC AGVVSGLGNV APGLLAQIIA GFNAGDMEAA RAAQENFAGL
RKDLYALGFP PALVKRALYL NDPSVGLSRQ PALLPDAAQD AQILAILTAR GLKE