Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3053 |
Symbol | |
ID | 4898459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | - |
Start bp | 64096 |
End bp | 64980 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640113655 |
Product | dihydrodipicolinate synthetase |
Protein accession | YP_001044925 |
Protein GI | 126463812 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.466068 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0327331 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCGCA ACGCCCATGT CGCCCTCGTG ACCTGCTTTC ACGAGGACGA GACCGTCAAC TATGCAGCCA CCCGCGCCCA GGTGCGCCGC CAGCTGGCCG CCGGCAACGA TCTCATGGTC TGCGGCACGA ACGGCGACTT CTCGGCCCTG ACCCATGACG AGAAGATCCG TCTGGTGGGA GAGGTGATGG AGGAAGTGGC GGGCCGCGCG AAGGTCATCG CCAATGTCGG CTGCCCCGCC ACCTTCGAGA CGCTCCAGCT CGCCCGCGCG GTGGACGGGA TGGGCCTGCA CGGCATCGCG GTCATTGCGC CCTACTTCAT CTCCTGCACG CAGGACGGGC TGATCCGGCA TTTCTCGACC GTCGCCGATG CCGTGACGAC GCCGGTCTAT CTTTACGACA TCCCGGCCCG CACCCAGAAC CATATCGAGC CCGCCACGGT GGGCACGCTC GCCCGCCATG GCAACATCGC GGGGATCAAG GATTCCGGCG GCGCGACCGA CACGGTGCGC GCCTATCTCG ACGTGGCGCG CGACGTGGAC GGGTTCGAGG TCTACTGCGC GCCCGACCAT CTGGTGCTCT GGGGCCTCGA GGAAGGCTGC GCGGGCGTCG TCTCGGGGCT CGGCAACGTG GCTCCGGGCC TGCTGGCGCA GATCATCGCG GGCTTCAACG CGGGCGACAT GGAGGCCGCC CGCGCGGCGC AGGAAAATTT CGCGGGACTG CGGAAGGACC TCTATGCCTT GGGCTTCCCG CCGGCGCTCG TCAAGCGCGC GCTCTATCTG AACGATCCTT CGGTCGGCCT CTCCCGGCAG CCCGCGCTGC TGCCCGACGC GGCGCAGGAC GCGCAGATCC TCGCCATCCT CACCGCGCGG GGCCTGAAGG AATGA
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Protein sequence | MTRNAHVALV TCFHEDETVN YAATRAQVRR QLAAGNDLMV CGTNGDFSAL THDEKIRLVG EVMEEVAGRA KVIANVGCPA TFETLQLARA VDGMGLHGIA VIAPYFISCT QDGLIRHFST VADAVTTPVY LYDIPARTQN HIEPATVGTL ARHGNIAGIK DSGGATDTVR AYLDVARDVD GFEVYCAPDH LVLWGLEEGC AGVVSGLGNV APGLLAQIIA GFNAGDMEAA RAAQENFAGL RKDLYALGFP PALVKRALYL NDPSVGLSRQ PALLPDAAQD AQILAILTAR GLKE
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