| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3028 |
|---|
| Symbol | |
|---|
| ID | 4898181 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009050 |
|---|
| Strand | - |
|---|
| Start bp | 35759 |
|---|
| End bp | 36115 |
|---|
| Gene Length | 357 bp |
|---|
| Protein Length | 118 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640113630 |
|---|
| Product | alkylhydroperoxidase |
|---|
| Protein accession | YP_001044900 |
|---|
| Protein GI | 126463787 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2128] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.970861 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGCAA TCTTCGCCGA CATCCGCGAG ACGCGGAAGA CCGATTATAT CAACAACTTC
TGGCGCGCTC TTGCCAACCA GCCCGAGCTT CTGGAAAGCA CCTGGAACCG GCTCCGGCAG
GTCATGGCGC CGGGCGCGCT CGATCCCCTG ACCAAGGAGC TGATCTATAT CGCCGTCTCG
GTGACGAACG GCTGTTCCTA CTGCACCCAT TCCCATACGG CCGCCGCCCG CGCCAAGGGG
CTCAGCCCGG AGCAGGAGGC CGAGTTCCTC GCGGTGCTGG GCATGGCGGC CCAGACCAAC
CAGCTCGTGA CCGCGCTTCA GGTGCCGGTC GACGCGGCCT TTCAGGTGGA AACATGA
|
|---|
| Protein sequence | MAAIFADIRE TRKTDYINNF WRALANQPEL LESTWNRLRQ VMAPGALDPL TKELIYIAVS
VTNGCSYCTH SHTAAARAKG LSPEQEAEFL AVLGMAAQTN QLVTALQVPV DAAFQVET
|
|---|
| |