Gene Rsph17029_3020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_3020 
Symbol 
ID4898653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp28932 
End bp29633 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content71% 
IMG OID640113622 
ProductABC transporter related 
Protein accessionYP_001044892 
Protein GI126463779 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0897255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCGAGG GGCCGCTCAT CGCGCTTCAG GGGATCGGCC GGTCCTATGG CGCGGGCGCG 
GCCGAGGTGC GCGCGCTCGA CGGGGTGGAT CTCACCATCC GGCGCGGCGA GTTCGTGGCG
ATCATGGGCC CCTCGGGGTC GGGCAAGTCG ACGGCGATGA ACATCATCGG CTGCCTCGAC
CGGCCCACCT CGGGGCGCTA CCTCTTCGAG GGGACCGACG TCTCGGGGCT CGACCGCGAC
GGGCGGGCGC TGCTGCGGCG GCACTTTCTG GGCTTCGTCT TTCAGGGCTT CAACCTCCTG
GCCCGCACCA CTGCGCTCGA GAATGTCGAG CTGCCGCTGA TCTACAAGGG CCTGCCGCGG
GCCGAGCGGA TCGAGAAGGC GCAGCGGGCG CTGGCGCGGG TGGGGCTGGC GGGGCGCGAG
CATCACGATC CCTCGCAGCT CTCGGGCGGC CAGCAGCAGC GGGTGGCCAT CGCCCGGGCG
CTGGCGGGCG AGCCCGCGGT GATCCTCGCC GACGAGCCCA CGGGCAACCT CGACAGCCAG
CGGTCGCATG AGATCATGCA GCTGATGCAG GCGCTGAACC GCGAAGGGAT CACCATCGTC
ATGGTCACCC ACGAAGAGGA TATCGCGGCC TATGCCGGGC GGCTCGTCGT CTTCACCGAC
GGCCACCTCA CGCGGGACGA GCCGGTGAAA GCGAGGGCCT GA
 
Protein sequence
MTEGPLIALQ GIGRSYGAGA AEVRALDGVD LTIRRGEFVA IMGPSGSGKS TAMNIIGCLD 
RPTSGRYLFE GTDVSGLDRD GRALLRRHFL GFVFQGFNLL ARTTALENVE LPLIYKGLPR
AERIEKAQRA LARVGLAGRE HHDPSQLSGG QQQRVAIARA LAGEPAVILA DEPTGNLDSQ
RSHEIMQLMQ ALNREGITIV MVTHEEDIAA YAGRLVVFTD GHLTRDEPVK ARA