Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_3020 |
Symbol | |
ID | 4898653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009050 |
Strand | - |
Start bp | 28932 |
End bp | 29633 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640113622 |
Product | ABC transporter related |
Protein accession | YP_001044892 |
Protein GI | 126463779 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0897255 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCGAGG GGCCGCTCAT CGCGCTTCAG GGGATCGGCC GGTCCTATGG CGCGGGCGCG GCCGAGGTGC GCGCGCTCGA CGGGGTGGAT CTCACCATCC GGCGCGGCGA GTTCGTGGCG ATCATGGGCC CCTCGGGGTC GGGCAAGTCG ACGGCGATGA ACATCATCGG CTGCCTCGAC CGGCCCACCT CGGGGCGCTA CCTCTTCGAG GGGACCGACG TCTCGGGGCT CGACCGCGAC GGGCGGGCGC TGCTGCGGCG GCACTTTCTG GGCTTCGTCT TTCAGGGCTT CAACCTCCTG GCCCGCACCA CTGCGCTCGA GAATGTCGAG CTGCCGCTGA TCTACAAGGG CCTGCCGCGG GCCGAGCGGA TCGAGAAGGC GCAGCGGGCG CTGGCGCGGG TGGGGCTGGC GGGGCGCGAG CATCACGATC CCTCGCAGCT CTCGGGCGGC CAGCAGCAGC GGGTGGCCAT CGCCCGGGCG CTGGCGGGCG AGCCCGCGGT GATCCTCGCC GACGAGCCCA CGGGCAACCT CGACAGCCAG CGGTCGCATG AGATCATGCA GCTGATGCAG GCGCTGAACC GCGAAGGGAT CACCATCGTC ATGGTCACCC ACGAAGAGGA TATCGCGGCC TATGCCGGGC GGCTCGTCGT CTTCACCGAC GGCCACCTCA CGCGGGACGA GCCGGTGAAA GCGAGGGCCT GA
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Protein sequence | MTEGPLIALQ GIGRSYGAGA AEVRALDGVD LTIRRGEFVA IMGPSGSGKS TAMNIIGCLD RPTSGRYLFE GTDVSGLDRD GRALLRRHFL GFVFQGFNLL ARTTALENVE LPLIYKGLPR AERIEKAQRA LARVGLAGRE HHDPSQLSGG QQQRVAIARA LAGEPAVILA DEPTGNLDSQ RSHEIMQLMQ ALNREGITIV MVTHEEDIAA YAGRLVVFTD GHLTRDEPVK ARA
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