| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_3018 |
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| Symbol | |
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| ID | 4898651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | - |
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| Start bp | 26408 |
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| End bp | 27547 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640113620 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001044890 |
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| Protein GI | 126463777 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCTT TCGAGAAGAA AGCGGCGTAT TCGCGCCGCT CGTTCCTGCG CACCGGTGCC
TTGGCCGGGG GTGCGGCGGC GGGGTCTGTC CTGGCGGCTC CGGCCGTTCT GGCCCAAGCG
CCGCTGGTGA TGAAGATGCA GACATCCTGG CCCGCCTCGG ACATCTGGAT GGACTTCGCC
CGCGAATATG TCACGCGGGT CGAGGAGATG TCGGGCGGCA GGCTCAAGGT GGACCTGCTG
CCGGCCGGAG CCGTGGTCGG CGCCTTCCAG GTGATGGATG CCGTGCATGA CGGCGTGATC
GACGCCTCGC ATTCCGTGTC GGCCTACTGG TACGGCAAGT CGAAGGCGGC CTCGTTCTTC
GGCACGGGCC CGGTCTTCGG CGGTTCGGCG ACCACGATGC TCGGCTGGTT CTATCAGGGC
GGCGGTCAGG ATCTCTACCG CGAGCTGACC CAGGACATTC TCGGAATGAA CATCGTGGGC
TTCTACGGCT TCCCGATGCC GGCCCAGCCC TTCGGCTGGT TCAAGACCGA GGTGAACGGC
GTCGCCGACA TCCAGGGCTT CAAATACCGG ACCGTGGGGC TGGCGGCCGA CCTGCTGCAG
GCGATGGGCA TGTCGGTGGC GCAGCTGCCC GGCGGCGAGA TCGTGCCGGC GATGGAGCGG
GGCGTGATCG ACGCGTTCGA GTTCAACAAC CCCTCGTCGG ACATGCGCTT CGGCGCGCAG
GACGTGGCGA AGAACTACTA TCTCTCCTCC TACCATCAGG CGTCCGAGAG CTTCGAATAT
ACGTTCAACC GCGATTTCTA CGAGGATCTG GATCCCGACC TGCAGGCGAT CCTGAAATAT
GCAGTGGAGG CGGCCTCGAC CTCGAACACG GCGCTGGCGC TGCGCCAGTA TTCGGCCGAT
CTCGCGACGC TCGCGGCCGA AAACGGGGTC GCGGTGCATC GGACCCCGAA GGATATCCTT
TCGGGCCAGC TCGAGGCCTG GGACAAGCTG ATCGTGGATC TCGAGGCCGA CGAGTTCTTC
AAGAAGGTCC TCGACAGCCA GCGCGCCTGG GTGGAGCAGG TGAGCTATTA CGAGCTGATG
AACGCGGCCG ACCTCGGGCT GGCCTACGAA CATCACTTCC CCGGCAAGCT CAAGCTCTGA
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| Protein sequence | MTAFEKKAAY SRRSFLRTGA LAGGAAAGSV LAAPAVLAQA PLVMKMQTSW PASDIWMDFA
REYVTRVEEM SGGRLKVDLL PAGAVVGAFQ VMDAVHDGVI DASHSVSAYW YGKSKAASFF
GTGPVFGGSA TTMLGWFYQG GGQDLYRELT QDILGMNIVG FYGFPMPAQP FGWFKTEVNG
VADIQGFKYR TVGLAADLLQ AMGMSVAQLP GGEIVPAMER GVIDAFEFNN PSSDMRFGAQ
DVAKNYYLSS YHQASESFEY TFNRDFYEDL DPDLQAILKY AVEAASTSNT ALALRQYSAD
LATLAAENGV AVHRTPKDIL SGQLEAWDKL IVDLEADEFF KKVLDSQRAW VEQVSYYELM
NAADLGLAYE HHFPGKLKL
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