Gene Rsph17029_2996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2996 
Symbol 
ID4898353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009050 
Strand
Start bp4526 
End bp5770 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content69% 
IMG OID640113598 
Producthypothetical protein 
Protein accessionYP_001044869 
Protein GI126463756 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.229433 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCGGC GGCGCCATCG GCGGTTGCCG CGCAGGCACC GGCCCGCCAT TGTATCCCTG 
CCTCCCTCTT ACGGACCTTC CATGCCCGAT GCCCATCCCC CGCCCAGCCC GTCCAAGGAC
CGCTCGTTCG CAGCGCGCGT CCAGACCGGC GCTCTCGTCA TCATCGCCTT CGCCGTGGTG
CTGGCCCTGC TCGTGCAGGC GCAGTTCATC CTGATCTCCC TCGCCGTCTC GGTGATCCTC
TTCAGCCTGA CCTCGGACGC CATCGCGCTC GTCGCGCGCG TCCGCTTCGG GCCGGTCAAG
ATCCCGAACT GGCTGGCGAG CAGCCTCGCG CTGCTCCTGC TGGCCATTGT GCTTCTGTCG
CTGGCCGCGG TGATCGTCTC GCAGGTCAAC ACGGTGCTCC TGACGGCGCT CAGCTACAGC
GAGCAGGCCC CGGCCGCCGT GGCCGCGATC TTCTCCTGGC TCGGCAAGGA CGCCGAGGAG
GCGGTGCTCT CCTCGCTCCG GGCCGTCGAG ATCTCGGGCT ATCTGCGCAC CCTCGCCGCT
CAGGCGGGCA CGCTGATGCA GGCCACGGTG CTCGTCATCC TGTTCGTGGG CTTCCTCTTC
GCCGAGCGGG TCTGGTTCCC CGTCAAGCTT CTGAACCTGT TCGGCAACCC CGACCGCGCC
CGCCGGGTCG AGGAGATCGT GAGCTCGATC ATGCACCGGG TGAACCGGTA CCTGCTGGTC
AAGACGCTGG TCTCGGCGAT CACCGGCCTG CTCGTCTGGG GCGTAGCGAT GGCCTTCGGG
CTGGATCTTG CAGCGCCGCT GGGGATGCTC ACCTTCATCC TGAACTTCAT CCCGAGCCTC
GGCTCGATCG TGGCCACGCT TCTCATCGTG CTCGTCACCT TCGTCCAGAC GGTCGATGTG
AGCACGGCGC TGTCGGTTCT GGCGCTGGTG GGGGTGATCC AGTTCGTCTG CGGCAACATC
CTCGACCCGA TGCTGATGGG CCGCGCGCTG CAGCTTTCGT CCTTCGGGAT CATCATCAGC
CTCGCCTTCT GGGGTGCGAT CTGGGGGATC CCGGGGATGT TCCTCTCGGT GCCGATCATG
GTCGGGCTGA TGATCGTCTG CGCCGAGACC GAGGCGCTGC GGCCCATTGC GGTGCTCCTG
TCGCGCGAGG GGCTGGCCGC GCCCATGCAC CCCGAACGCC CGGCACCCCC GCCCCGGGCC
GAACCCGAGC CCGAGACGGT GGCGTCGCGG CGGGTGGGCC GCTGA
 
Protein sequence
MPRRRHRRLP RRHRPAIVSL PPSYGPSMPD AHPPPSPSKD RSFAARVQTG ALVIIAFAVV 
LALLVQAQFI LISLAVSVIL FSLTSDAIAL VARVRFGPVK IPNWLASSLA LLLLAIVLLS
LAAVIVSQVN TVLLTALSYS EQAPAAVAAI FSWLGKDAEE AVLSSLRAVE ISGYLRTLAA
QAGTLMQATV LVILFVGFLF AERVWFPVKL LNLFGNPDRA RRVEEIVSSI MHRVNRYLLV
KTLVSAITGL LVWGVAMAFG LDLAAPLGML TFILNFIPSL GSIVATLLIV LVTFVQTVDV
STALSVLALV GVIQFVCGNI LDPMLMGRAL QLSSFGIIIS LAFWGAIWGI PGMFLSVPIM
VGLMIVCAET EALRPIAVLL SREGLAAPMH PERPAPPPRA EPEPETVASR RVGR