Gene Rsph17029_2979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2979 
SymbolflhA 
ID4897742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp3138889 
End bp3140955 
Gene Length2067 bp 
Protein Length688 aa 
Translation table11 
GC content65% 
IMG OID640113582 
Productflagellar biosynthesis protein FlhA 
Protein accessionYP_001044853 
Protein GI126463739 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1298] Flagellar biosynthesis pathway, component FlhA 
TIGRFAM ID[TIGR01398] flagellar biosynthesis protein FlhA 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.948714 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGT CCCGGGACCG CCTTTTCCAG CCGACCATCC TGCTGGCGCT TGCCCTCATG 
GCGGTCATCG TCATGATGGT CCTGCCGGTG CCCGCCTGGA TGCTGGACCT GGGCCTCGCC
CTCTCGTTCT CGCTCGCCAT CCTCATGTTC ACCGTCACGC TCTTCATCGA GCGGCCTCTC
GATTTTTCGG CCTTCCCCAC CGTCCTTCTT TCGTCGCTGA TGCTTCGCCT CTCGCTGAAC
ATCTCCTCGA CCAAGCTCAT CATCGGCAAC GGTCACACAG GCACCGCTGC GGCCGGTCAT
GTCATCGAGG GCTTCGCCAG CTTCATCATG AACGGCAGCG TCATGATGGG GGTCGTCATC
TTCTGTGTCC TGCTGATCGT GAACTTCGTT GTCATCACCA AGGGCGCCGG GCGCATGGCC
GAGGTGGGCG CGCGCTTTGC TCTTGACGGC ATGCCCGGCA AGCAGCTTGC CATCGACAGC
GACATGTCCG CCGGCGCCAT AGATCACGCG GAGGCCAGAC GCAGGCGCGA GCAGGAGCTG
GCTGAAACCA ACTTCTTCGG CTCGCTCGAC GGCGCCTCGA AATTCGTCAA GGGCGACGCA
GTCGCCGGAT TGCTCATCAC GGGCCTCAAC ATCGTCGTGG GCTTGCTCGT CGGCGTCCTG
ATGCATGACA TGCCGATCGG CCGCGCCTTC GAGACCTATG CCATCCTCAC CATCGGTGAT
GGGCTTGTGA GCCAGATCCC CGCGGTCATC ATCTCGATCG CGGCGGCCCT TCTCCTGGCG
CGTGGGGGTG CGGCAGGTGC CGCGGATGTC TCCTTCTTCA AGCAGCTTGG CCGCTTTCCT
GCCGCTCTCG CCACTGTGTC GCTTCTGATG GCTCTGTTCG CGCTGGTGCC CGGGTTGCCG
TTCGGCCCGT TCATGGCGGC GGCGACCGGG CTCGGCGCCC TCTCCTTCAT GGGCCTTCGC
AGGGCAGAAG ACCCGACCGC TCCCACCTCG ACCGAGGCCG AGGTTCCGAC TGCGAGGTCT
CTGGGTGACG TCCTCGACTT TGACGACATT CACATCGAGT TCGCTCCGAA CCTCGTCGGG
ATGGTGCTTG ATCCGGCGAC GGGGCTCGAT GCGCGCATCG TGAACATGCG CAACCATATC
GCTGGCGCCT TCGGGCTGAT CCTGCCGGAA ATCCGGGTGA CCGACGAGAC TATGCTTCCT
CCCGGGAGCT ACAGGATCCG GCTTCAGGGG GTCGAGCGCG TGCGTGATCG CCTCCTGCCG
GACCGTCTGC TCGTGCTCCT GATGGAGGGG ACCGAGGCGC CGGAAGGGAT TGACGTGCGC
GAGCCGGTGT ATGGCGCGCC CGCGCGCTGG ATCCTTCCGG ACGATCAGGA GAGGGCCGCC
CTGGCCGGGT TGACTGTGGT CACACCGGCA GAGGTGCTTG CCACCCATCT TCTCGAGGTC
ATGAAGGGCA ATCTCGCGCG TCTCTTGACG CTCAAGGGTC TGCGACGTCT GCTGGACGAA
TTCACCAATC TCTCGGACCG CAGCCGGGCC GAGGCGAACC GGCGCCTGCT CGACGAGCTT
GTGCCAGACC GTGTGCCGGT GGATCTGCTG CTCGCGGTGC TCCGTCTTCT CCTGGAGGAG
CGGGTGTCGA TCCGAAATCT TCCCCTGATT CTCGAAGCCA TTGCCGAGGC TCGCGCGCTC
GGTTCGCCCG AAGAGATCTG TGAACATGTG CGACAGCGGC TGGGCTTCCA GATCGTCGCC
GAGCTGAAAC GCGAGGATGG CACCGTTCCC CTGATCCAGC TCGCGCCGGA ATGGGAAAAG
ACCTTCGCGG CGCATCAGCT CGAAGGGCGG GGTCTGCGTG ACGTGGCGCT GCCACCAGAG
GCCTTCAGCC GATTGGCGAA CGGTCTGGCC GAGAAGCTCG CACGGGCGGC CGACATGGGG
CTCCAGCCGG CACTTGTGAC CTCGACGCTC CGCCGCCGCT TCCTGCGCGC CGTTGTGGCC
GCCAAAGGAC TGATCGTTCC GGTGATCTCC TATGACGAGA TCGGCACGGA GGCGCGCGCC
GCCATGGTGG GCACCGTCCC GGCATGA
 
Protein sequence
MRLSRDRLFQ PTILLALALM AVIVMMVLPV PAWMLDLGLA LSFSLAILMF TVTLFIERPL 
DFSAFPTVLL SSLMLRLSLN ISSTKLIIGN GHTGTAAAGH VIEGFASFIM NGSVMMGVVI
FCVLLIVNFV VITKGAGRMA EVGARFALDG MPGKQLAIDS DMSAGAIDHA EARRRREQEL
AETNFFGSLD GASKFVKGDA VAGLLITGLN IVVGLLVGVL MHDMPIGRAF ETYAILTIGD
GLVSQIPAVI ISIAAALLLA RGGAAGAADV SFFKQLGRFP AALATVSLLM ALFALVPGLP
FGPFMAAATG LGALSFMGLR RAEDPTAPTS TEAEVPTARS LGDVLDFDDI HIEFAPNLVG
MVLDPATGLD ARIVNMRNHI AGAFGLILPE IRVTDETMLP PGSYRIRLQG VERVRDRLLP
DRLLVLLMEG TEAPEGIDVR EPVYGAPARW ILPDDQERAA LAGLTVVTPA EVLATHLLEV
MKGNLARLLT LKGLRRLLDE FTNLSDRSRA EANRRLLDEL VPDRVPVDLL LAVLRLLLEE
RVSIRNLPLI LEAIAEARAL GSPEEICEHV RQRLGFQIVA ELKREDGTVP LIQLAPEWEK
TFAAHQLEGR GLRDVALPPE AFSRLANGLA EKLARAADMG LQPALVTSTL RRRFLRAVVA
AKGLIVPVIS YDEIGTEARA AMVGTVPA