Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2967 |
Symbol | |
ID | 4896308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 3126340 |
End bp | 3129189 |
Gene Length | 2850 bp |
Protein Length | 949 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640113570 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_001044841 |
Protein GI | 126463727 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.291071 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.350737 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGTCG CCCTCGACAA GATATTTGCC GAAGACCCAT CGCCCTACGT CCTTCTTGAC CGGGATCTCA CGATGATCTG GGCCAATGCC GCCTACCTGC GCGCCACGGG TCTGGCGCGC GACGAGGTTG TCGGGCGCCG CATGTTCGAC GTCTTCCCCG CAGAGGCCGA GTCCATCCCG GACCAGATGC TGCGCGCCTC CTTGCGCCGC GCGGTCGAGC AGGGCCGACC GGACCATTTG CCGCTGATTC CCTATCCGAT CCGCAATCAG GACGGCCGGA TGGAGGAGCG GTTCTGGAGC GCGACCAATA CGCCCATCAA GGATGCCGAG GGCCACGTCG AGTTCATCCT GCAGAACACC AACGACATCA CGGCGCTGTA TCGCGAGGAT CGGACCTCTT CCCAACCGAA CGATCAGGCC AGGATGCTCC AGCGGGCCGA AGCGGTCACG CGTCAGAATC TCGAACTCGG CAGCGCGGTC GACTTCTTTC GCAGCGCGAT CGACCAGGCG CCGAGCTTCA TGGCCGTGCT CGACGGGCGC GACCATGTCT TCCGCATCGT GAACCAGGCC TACCACCAGC TCGTCGGCCG CCGAGACCTG CTGAACCGCA CGGTCCGCGA GGCGCTGCCC GAACTCGACG GCCAGGGCTT CTTCGAACTC CTCGACGAGG TCTTCCTGAC GGGGCTCGCA TTCACCCGGC TGGCGGCGCC CGTGCTGCTC CGGCGCGGCC CCGAGATCGA GCGCAGTTTC GTCGATTTCA TCATGTGCCC GCTGAGGGGA CCCGACGGAC AGGTGCGCGG CGTCTTCGTC GAGGGACATG ACGTCACACG CCAGAAGATT GCCGAGGCCG AGGTGATCGA GACGCGCGAG CGGTTCCGGA CCATGGCCCA GACCATGCCC AACCACGTCT GGACGGCCAC GCCCGAAGGG CGGCTCGACT GGCTGAACGA CCGGCTCCTC GACTATTGCG GACGCACCGA AGCCGACCTG ATCGGCCTGC CGCCCATGGC GATCGTCCGG CCGGAAGACA GGCCGCAGGC GGAAGCGGCC TGGGTGCAAT CGCTGGCCCA GGGAACCGCC TTCGAGCGCG AGCTGCGGAT CCGGCGCCAC GACGGCGCCG ATCGCTGGCA TCTGTCGCGC GCCCTGCCGA TCCGCGACGA TCAGGGCCGG ATCCTGCGCT GGATCGGGAC CAACACGGAT ATCGAGGATC GCAAGGTTGC CGAGGAAGCC ATCGCGGGTC TGAATGCTGC GCTGGAGGAG CGGGTGCAGC AGCGCAACCG TGAGCTCGAA GAAATGAGCG ATACGTTGCG CCAGAGCCAG AAGATGGAGG CGATCGGAAA TCTCGCTGGC GGAATCGCGC ATGATTTCAA CAATCTGCTG CAGACGATCA CGGGCAGTAT CCAGCTCTCT CTTCGCGCTC TCGACGAGGA TCACGCCGCG CGCCCGCGTC TCGACCAGGC TCTTCGCGCG GTCGAGCGCG GGGCGACGCT CGCGTCACAG CTGCTGGCCT TCGGACGCAG GCAACCCCTT GCGCCTCGGG TCATCAACCT GGGACGTCTG CTGCGCGACG CGGACCACAT CGTCCGGAGC GCCGTGGGCG AGGGGGTCGA GGTCGAGACT CTGGTGGCTG GCGGGCTCTG GAACACCTGC GTCGACCCCG CCAATGTCGA GACCGCGATC CTCAACCTCG CGATCAATGC CCGGGACGCG ATGGAGGGGC GCGGGCGTCT CACCATCGAG ATCGGGAACT CCTTCCTGGA CGACAGCTAT ACGCGCGGCC ATCCCGACCT CGAACCCGGC CAGTATGTGA TGCTTGCCGT GACCGATACG GGCTGCGGCA TGTCCCCGGA GGTGATCGAG CGCGTGTTCG AGCCGTTCTT CACCACCAAG GCGGAAGGGC GCGGCACAGG CCTCGGCATG TCCATGGTCT ACGGGTTCGT CAAACAGTCG GGCGGCCACG TCAAGATCTA CAGCGAGCTC GGCAACGGAA CCTCCATCAA GATCTATCTT CCCCGGTCGC TGGAGGCCGA GGACGCAATG CGACCCCTCG ACACCGGCCC CATGACCGGA GGAACCGAGA CCATCCTGCT GGTGGAGGAT GACGAGCAGG TGCGGTCCAC CGCGGCGGGC CTACTGCAGG ATCTCGGCTA TTCGGTTCTG CAGGCCAAGG ACGCGGACCG CGCGCTCACG ATCGTGGAAA GCGGTGCACG GATCGACCTT CTCTTCACCG ACGTGGTCAT GCCGGGCAAG TTGACGAGCC GTCAGCTCGC GGAGAAGACG CGCGGCTTGC GCCCGGGACT GCCGGTGCTC TTCACCTCGG GCTACACGCA GAACTCCATC GTTCACGGCG GACGGCTCGA CAGCGGCGTG CATCTGCTCA GCAAGCCCTA TACGCAGGAA GCTCTGGCCC GGAAGATCCG GGAGGTTCTT GTCAGCGGTG CGAGCGGCCC TCCCGAGGAA GACGGTTTGA AGAATATCCA TGTCCTCGTC TGCGAGGATG ATGTCATCAT CCGGATGAAC CTTGTCGAAG GTCTGACGGA GGCGGGGTGC CGGGTCTCAC AGGCCGGCTC CGGCGAGGCC GCCCTGAGCG TACTGCAGCA CGGTGCGGCC GATCTGCTGC TGGTCGATCT GGGCCTGCCG GATATGAGCG GCGTGGACCT GGCCCGGGCG GCCCGCGCGC TCCACCCCGA TCTGCCGATC CTCTTCGCCA CGGGCGACAG CCGGGTGCCG GATGAGGAGT TCCGGCCCCG GGTCGCCGTG CTCGCCAAGC CGTTCGGCGA TGAGGCCCTG CTGGACGGGG TGGCCCGGTT GGTCGGCAGG CGCCCTCATC TCACGATGAA TTCTGCATGA
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Protein sequence | MLVALDKIFA EDPSPYVLLD RDLTMIWANA AYLRATGLAR DEVVGRRMFD VFPAEAESIP DQMLRASLRR AVEQGRPDHL PLIPYPIRNQ DGRMEERFWS ATNTPIKDAE GHVEFILQNT NDITALYRED RTSSQPNDQA RMLQRAEAVT RQNLELGSAV DFFRSAIDQA PSFMAVLDGR DHVFRIVNQA YHQLVGRRDL LNRTVREALP ELDGQGFFEL LDEVFLTGLA FTRLAAPVLL RRGPEIERSF VDFIMCPLRG PDGQVRGVFV EGHDVTRQKI AEAEVIETRE RFRTMAQTMP NHVWTATPEG RLDWLNDRLL DYCGRTEADL IGLPPMAIVR PEDRPQAEAA WVQSLAQGTA FERELRIRRH DGADRWHLSR ALPIRDDQGR ILRWIGTNTD IEDRKVAEEA IAGLNAALEE RVQQRNRELE EMSDTLRQSQ KMEAIGNLAG GIAHDFNNLL QTITGSIQLS LRALDEDHAA RPRLDQALRA VERGATLASQ LLAFGRRQPL APRVINLGRL LRDADHIVRS AVGEGVEVET LVAGGLWNTC VDPANVETAI LNLAINARDA MEGRGRLTIE IGNSFLDDSY TRGHPDLEPG QYVMLAVTDT GCGMSPEVIE RVFEPFFTTK AEGRGTGLGM SMVYGFVKQS GGHVKIYSEL GNGTSIKIYL PRSLEAEDAM RPLDTGPMTG GTETILLVED DEQVRSTAAG LLQDLGYSVL QAKDADRALT IVESGARIDL LFTDVVMPGK LTSRQLAEKT RGLRPGLPVL FTSGYTQNSI VHGGRLDSGV HLLSKPYTQE ALARKIREVL VSGASGPPEE DGLKNIHVLV CEDDVIIRMN LVEGLTEAGC RVSQAGSGEA ALSVLQHGAA DLLLVDLGLP DMSGVDLARA ARALHPDLPI LFATGDSRVP DEEFRPRVAV LAKPFGDEAL LDGVARLVGR RPHLTMNSA
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