Gene Rsph17029_2967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2967 
Symbol 
ID4896308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp3126340 
End bp3129189 
Gene Length2850 bp 
Protein Length949 aa 
Translation table11 
GC content66% 
IMG OID640113570 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_001044841 
Protein GI126463727 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.291071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.350737 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGTCG CCCTCGACAA GATATTTGCC GAAGACCCAT CGCCCTACGT CCTTCTTGAC 
CGGGATCTCA CGATGATCTG GGCCAATGCC GCCTACCTGC GCGCCACGGG TCTGGCGCGC
GACGAGGTTG TCGGGCGCCG CATGTTCGAC GTCTTCCCCG CAGAGGCCGA GTCCATCCCG
GACCAGATGC TGCGCGCCTC CTTGCGCCGC GCGGTCGAGC AGGGCCGACC GGACCATTTG
CCGCTGATTC CCTATCCGAT CCGCAATCAG GACGGCCGGA TGGAGGAGCG GTTCTGGAGC
GCGACCAATA CGCCCATCAA GGATGCCGAG GGCCACGTCG AGTTCATCCT GCAGAACACC
AACGACATCA CGGCGCTGTA TCGCGAGGAT CGGACCTCTT CCCAACCGAA CGATCAGGCC
AGGATGCTCC AGCGGGCCGA AGCGGTCACG CGTCAGAATC TCGAACTCGG CAGCGCGGTC
GACTTCTTTC GCAGCGCGAT CGACCAGGCG CCGAGCTTCA TGGCCGTGCT CGACGGGCGC
GACCATGTCT TCCGCATCGT GAACCAGGCC TACCACCAGC TCGTCGGCCG CCGAGACCTG
CTGAACCGCA CGGTCCGCGA GGCGCTGCCC GAACTCGACG GCCAGGGCTT CTTCGAACTC
CTCGACGAGG TCTTCCTGAC GGGGCTCGCA TTCACCCGGC TGGCGGCGCC CGTGCTGCTC
CGGCGCGGCC CCGAGATCGA GCGCAGTTTC GTCGATTTCA TCATGTGCCC GCTGAGGGGA
CCCGACGGAC AGGTGCGCGG CGTCTTCGTC GAGGGACATG ACGTCACACG CCAGAAGATT
GCCGAGGCCG AGGTGATCGA GACGCGCGAG CGGTTCCGGA CCATGGCCCA GACCATGCCC
AACCACGTCT GGACGGCCAC GCCCGAAGGG CGGCTCGACT GGCTGAACGA CCGGCTCCTC
GACTATTGCG GACGCACCGA AGCCGACCTG ATCGGCCTGC CGCCCATGGC GATCGTCCGG
CCGGAAGACA GGCCGCAGGC GGAAGCGGCC TGGGTGCAAT CGCTGGCCCA GGGAACCGCC
TTCGAGCGCG AGCTGCGGAT CCGGCGCCAC GACGGCGCCG ATCGCTGGCA TCTGTCGCGC
GCCCTGCCGA TCCGCGACGA TCAGGGCCGG ATCCTGCGCT GGATCGGGAC CAACACGGAT
ATCGAGGATC GCAAGGTTGC CGAGGAAGCC ATCGCGGGTC TGAATGCTGC GCTGGAGGAG
CGGGTGCAGC AGCGCAACCG TGAGCTCGAA GAAATGAGCG ATACGTTGCG CCAGAGCCAG
AAGATGGAGG CGATCGGAAA TCTCGCTGGC GGAATCGCGC ATGATTTCAA CAATCTGCTG
CAGACGATCA CGGGCAGTAT CCAGCTCTCT CTTCGCGCTC TCGACGAGGA TCACGCCGCG
CGCCCGCGTC TCGACCAGGC TCTTCGCGCG GTCGAGCGCG GGGCGACGCT CGCGTCACAG
CTGCTGGCCT TCGGACGCAG GCAACCCCTT GCGCCTCGGG TCATCAACCT GGGACGTCTG
CTGCGCGACG CGGACCACAT CGTCCGGAGC GCCGTGGGCG AGGGGGTCGA GGTCGAGACT
CTGGTGGCTG GCGGGCTCTG GAACACCTGC GTCGACCCCG CCAATGTCGA GACCGCGATC
CTCAACCTCG CGATCAATGC CCGGGACGCG ATGGAGGGGC GCGGGCGTCT CACCATCGAG
ATCGGGAACT CCTTCCTGGA CGACAGCTAT ACGCGCGGCC ATCCCGACCT CGAACCCGGC
CAGTATGTGA TGCTTGCCGT GACCGATACG GGCTGCGGCA TGTCCCCGGA GGTGATCGAG
CGCGTGTTCG AGCCGTTCTT CACCACCAAG GCGGAAGGGC GCGGCACAGG CCTCGGCATG
TCCATGGTCT ACGGGTTCGT CAAACAGTCG GGCGGCCACG TCAAGATCTA CAGCGAGCTC
GGCAACGGAA CCTCCATCAA GATCTATCTT CCCCGGTCGC TGGAGGCCGA GGACGCAATG
CGACCCCTCG ACACCGGCCC CATGACCGGA GGAACCGAGA CCATCCTGCT GGTGGAGGAT
GACGAGCAGG TGCGGTCCAC CGCGGCGGGC CTACTGCAGG ATCTCGGCTA TTCGGTTCTG
CAGGCCAAGG ACGCGGACCG CGCGCTCACG ATCGTGGAAA GCGGTGCACG GATCGACCTT
CTCTTCACCG ACGTGGTCAT GCCGGGCAAG TTGACGAGCC GTCAGCTCGC GGAGAAGACG
CGCGGCTTGC GCCCGGGACT GCCGGTGCTC TTCACCTCGG GCTACACGCA GAACTCCATC
GTTCACGGCG GACGGCTCGA CAGCGGCGTG CATCTGCTCA GCAAGCCCTA TACGCAGGAA
GCTCTGGCCC GGAAGATCCG GGAGGTTCTT GTCAGCGGTG CGAGCGGCCC TCCCGAGGAA
GACGGTTTGA AGAATATCCA TGTCCTCGTC TGCGAGGATG ATGTCATCAT CCGGATGAAC
CTTGTCGAAG GTCTGACGGA GGCGGGGTGC CGGGTCTCAC AGGCCGGCTC CGGCGAGGCC
GCCCTGAGCG TACTGCAGCA CGGTGCGGCC GATCTGCTGC TGGTCGATCT GGGCCTGCCG
GATATGAGCG GCGTGGACCT GGCCCGGGCG GCCCGCGCGC TCCACCCCGA TCTGCCGATC
CTCTTCGCCA CGGGCGACAG CCGGGTGCCG GATGAGGAGT TCCGGCCCCG GGTCGCCGTG
CTCGCCAAGC CGTTCGGCGA TGAGGCCCTG CTGGACGGGG TGGCCCGGTT GGTCGGCAGG
CGCCCTCATC TCACGATGAA TTCTGCATGA
 
Protein sequence
MLVALDKIFA EDPSPYVLLD RDLTMIWANA AYLRATGLAR DEVVGRRMFD VFPAEAESIP 
DQMLRASLRR AVEQGRPDHL PLIPYPIRNQ DGRMEERFWS ATNTPIKDAE GHVEFILQNT
NDITALYRED RTSSQPNDQA RMLQRAEAVT RQNLELGSAV DFFRSAIDQA PSFMAVLDGR
DHVFRIVNQA YHQLVGRRDL LNRTVREALP ELDGQGFFEL LDEVFLTGLA FTRLAAPVLL
RRGPEIERSF VDFIMCPLRG PDGQVRGVFV EGHDVTRQKI AEAEVIETRE RFRTMAQTMP
NHVWTATPEG RLDWLNDRLL DYCGRTEADL IGLPPMAIVR PEDRPQAEAA WVQSLAQGTA
FERELRIRRH DGADRWHLSR ALPIRDDQGR ILRWIGTNTD IEDRKVAEEA IAGLNAALEE
RVQQRNRELE EMSDTLRQSQ KMEAIGNLAG GIAHDFNNLL QTITGSIQLS LRALDEDHAA
RPRLDQALRA VERGATLASQ LLAFGRRQPL APRVINLGRL LRDADHIVRS AVGEGVEVET
LVAGGLWNTC VDPANVETAI LNLAINARDA MEGRGRLTIE IGNSFLDDSY TRGHPDLEPG
QYVMLAVTDT GCGMSPEVIE RVFEPFFTTK AEGRGTGLGM SMVYGFVKQS GGHVKIYSEL
GNGTSIKIYL PRSLEAEDAM RPLDTGPMTG GTETILLVED DEQVRSTAAG LLQDLGYSVL
QAKDADRALT IVESGARIDL LFTDVVMPGK LTSRQLAEKT RGLRPGLPVL FTSGYTQNSI
VHGGRLDSGV HLLSKPYTQE ALARKIREVL VSGASGPPEE DGLKNIHVLV CEDDVIIRMN
LVEGLTEAGC RVSQAGSGEA ALSVLQHGAA DLLLVDLGLP DMSGVDLARA ARALHPDLPI
LFATGDSRVP DEEFRPRVAV LAKPFGDEAL LDGVARLVGR RPHLTMNSA