Gene Rsph17029_2947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2947 
Symbol 
ID4895698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp3102074 
End bp3102775 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content71% 
IMG OID640113550 
ProductABC transporter related 
Protein accessionYP_001044821 
Protein GI126463707 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.921249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTTC TGGAAGCCCG CGGTCTCGTG CGCCACTTCG GCGGCCTCCG CGCGATCGAC 
GGGGTGGATT TCGACCTCGC CGCGGGCGAG ATCCATGCGC TGATCGGGCC GAACGGCGCG
GGCAAGTCCA CGCTCGTGGG GCTTCTGTCG GGGCGCATCC CGGCGCAGGC GGGCACGATC
CGCTTCGACG GGCGCGACAT CACCCGCCTG CCCGCCCATG CCCGGGTGGG CTGCGGCATC
GCCTATGCCT TCCAGATCAC CTCGGTCTTC CCGAGGCTCA CGACCTTCGA CAATGTGGCG
CTGGCCGTGC AGCGCACCGG CGCGCGGGAT CTGGCCGCCG CGACGGAGGC CGCGCTCGCC
CGCGTGGGGC TTTCGGGCGA GGCGGGGCAG CTTGCGGGCA CGCTCTCCTA CGGCCACCAG
AGGCTGCTCG AGATCGCCAT GGGCCTTGCC CTCGCGCCGC GGCTGCTGAT CCTCGACGAG
CCGACGCAGG GCCTCGCTTC GGGCGAGATC GAGAGCTTCA TGACGCTGGT GCGCAGCCTT
GTGCCCGAGG TGACGGTGCT TCTGATCGAG CACAACATGG AGGTGGTGAT GGATCTCGCC
CAGCGCATCA CGGTGCTGAA CGCCGGTCGG GTGCTGGCGC AGGGCACGCC CGCCGAGATC
CAGGCCGACC GCGCGGTGCA GGCCGCCTAT CTCGGAGGCT GA
 
Protein sequence
MSLLEARGLV RHFGGLRAID GVDFDLAAGE IHALIGPNGA GKSTLVGLLS GRIPAQAGTI 
RFDGRDITRL PAHARVGCGI AYAFQITSVF PRLTTFDNVA LAVQRTGARD LAAATEAALA
RVGLSGEAGQ LAGTLSYGHQ RLLEIAMGLA LAPRLLILDE PTQGLASGEI ESFMTLVRSL
VPEVTVLLIE HNMEVVMDLA QRITVLNAGR VLAQGTPAEI QADRAVQAAY LGG